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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   543353   cold-regulated 413 plasma membrane protein 1 
 osa-u.5   4334237   cold-regulated 413 plasma membrane protein 2 
 zma-u.5   100282221   cold acclimation protein COR413-PM1 
 zma-u.5   542099   Cold-regulated 413 plasma membrane protein 2 
 ath-u.5   COR413-PM1   cold regulated 413 plasma membrane 1 
 ath-u.5   COR413-PM2   cold-regulated 413-plasma membrane 2 
 ath-u.5   AT4G37220   Cold acclimation protein WCOR413 family 
 gma-u.5   COR1   cold-regulated protein 
 gma-u.5   100810337   cold-regulated 413 plasma membrane protein 2 
 gma-u.5   100811430   cold-regulated 413 plasma membrane protein 1 
 sly-u.5   101259505   cold-regulated 413 plasma membrane protein 2 
 sly-u.5   101259682   WCOR413-like plant cold acclimation protein 
 vvi-u.5   100267774   cold-regulated 413 plasma membrane protein 2 
 vvi-u.5   100248690   cold-regulated 413 plasma membrane protein 2 
 ppo-u.5   7456406   cold-regulated 413 plasma membrane protein 1 
 ppo-u.5   18101203   cold-regulated 413 plasma membrane protein 2 
 ppo-u.5   7480606   cold-regulated 413 plasma membrane protein 1 
 mtr-u.5   25482681   cold-regulated 413 plasma membrane protein 1 
 mtr-u.5   11414899   cold-regulated 413 plasma membrane protein 1 

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Top 50 coexpressed genes to 543353 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 543353 (tae-r.2 coexpression data)

CoexMap"543353"


taeLOC543353 | Entrez gene ID : 543353    
Species tae osa zma ath gma sly vvi ppo mtr sbi nta bra cre hvu cit bdi sot bna ghi
Paralog 1 1 2 3 3 2 2 3 2 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0016020 [list] [network] membrane  (10843 genes)  IEA  
GO MF
Protein XP_044399280.1 [sequence] [blastp]
Subcellular
localization
wolf
vacu 5,  plas 4,  cyto 1,  golg 1  (predict for XP_044399280.1)
Subcellular
localization
TargetP
other 5,  scret 5  (predict for XP_044399280.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
543353

.
osa-u.5
for
4334237

.
zma-u.5
for
100282221

.
zma-u.5
for
542099

.
ath-u.5
for
COR413-PM1

.
ath-u.5
for
COR413-PM2

.
ath-u.5
for
AT4G37220

.
gma-u.5
for
COR1

.
gma-u.5
for
100810337

.
gma-u.5
for
100811430

.
sly-u.5
for
101259505

.
sly-u.5
for
101259682

.
vvi-u.5
for
100267774

.
vvi-u.5
for
100248690

.
ppo-u.5
for
7456406

.
ppo-u.5
for
18101203

.
ppo-u.5
for
7480606

.
mtr-u.5
for
25482681

.
mtr-u.5
for
11414899

.


Ortholog ID: 2376
Species ath ath gma gma sly sly osa zma zma bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna sbi sot sot cit cit bdi nta nta
Symbol AT4G37220 COR413-PM2 LOC100810337 LOC100811430 LOC101259682 LOC101259505 LOC4334237 LOC100282221 LOC542099 LOC103835009 LOC100248690 LOC100267774 LOC7480606 LOC7456406 LOC11414899 LOC25482681 LOC123122960 LOC543255 LOC123452399 LOC123452401 LOC107942145 LOC121209662 LOC106425620 LOC106445618 LOC8086182 LOC102589207 LOC102596410 LOC102614347 LOC102620025 LOC100844112 LOC107819619 LOC107779465
Function* Cold acclimation protein WCOR413 family cold-regulated 413-plasma membrane 2 cold-regulated 413 plasma membrane protein 2 cold-regulated 413 plasma membrane protein 1 WCOR413-like plant cold acclimation protein cold-regulated 413 plasma membrane protein 2 cold-regulated 413 plasma membrane protein 2 cold acclimation protein COR413-PM1 Cold-regulated 413 plasma membrane protein 2 cold-regulated 413 plasma membrane protein 4 cold-regulated 413 plasma membrane protein 2 cold-regulated 413 plasma membrane protein 2 cold-regulated 413 plasma membrane protein 1 cold-regulated 413 plasma membrane protein 1 cold-regulated 413 plasma membrane protein 1 cold-regulated 413 plasma membrane protein 1 cold-regulated 413 plasma membrane protein 1 cold-regulated 413 plasma membrane protein 1 cold-regulated 413 plasma membrane protein 1-like cold-regulated 413 plasma membrane protein 1-like cold-regulated 413 plasma membrane protein 2 cold-regulated 413 plasma membrane protein 2 cold-regulated 413 plasma membrane protein 2 cold-regulated 413 plasma membrane protein 1 cold-regulated 413 plasma membrane protein 2 cold-regulated 413 plasma membrane protein 2-like cold-regulated 413 plasma membrane protein 2-like cold-regulated 413 plasma membrane protein 1 cold-regulated 413 plasma membrane protein 2 cold-regulated 413 plasma membrane protein 1 cold-regulated 413 plasma membrane protein 1 cold-regulated 413 plasma membrane protein 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00280 Valine, leucine and isoleucine degradation 8
ath00640 Propanoate metabolism 4
ath01210 2-Oxocarboxylic acid metabolism 4
ath01250 Biosynthesis of nucleotide sugars 3
ath00785 Lipoic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00280 Valine, leucine and isoleucine degradation 4
sly00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00190 Oxidative phosphorylation 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04145 Phagosome 5
osa00190 Oxidative phosphorylation 4
osa04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04626 Plant-pathogen interaction 5
zma04016 MAPK signaling pathway - plant 5
zma04075 Plant hormone signal transduction 5
zma04070 Phosphatidylinositol signaling system 4
zma00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01230 Biosynthesis of amino acids 3
vvi00260 Glycine, serine and threonine metabolism 2
vvi00630 Glyoxylate and dicarboxylate metabolism 2
vvi00670 One carbon pool by folate 2
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00562 Inositol phosphate metabolism 2
ppo04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 6
ppo04016 MAPK signaling pathway - plant 5
ppo02010 ABC transporters 3
ppo00073 Cutin, suberine and wax biosynthesis 2
ppo04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00562 Inositol phosphate metabolism 2
mtr04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 12
ghi04016 MAPK signaling pathway - plant 2
ghi00562 Inositol phosphate metabolism 2
ghi04070 Phosphatidylinositol signaling system 2
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04082 Neuroactive ligand signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 3
sbi03250 Viral life cycle - HIV-1 2
sbi03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00052 Galactose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04712 Circadian rhythm - plant 4
nta00970 Aminoacyl-tRNA biosynthesis 2
nta04016 MAPK signaling pathway - plant 2
nta04075 Plant hormone signal transduction 2
nta04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04712 Circadian rhythm - plant 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829876 824247 100810337 100811430 101259682 101259505 4334237 100282221 542099 103835009 100248690 100267774 7480606 7456406 11414899 25482681 123122960 543255 123452399 123452401 107942145 121209662 106425620 106445618 8086182 102589207 102596410 102614347 102620025 100844112 107819619 107779465
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