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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   SFERH-4   ferritin 
 gma-r.7   SFERH-4   ferritin 
 gma-m.5   SFERH-4   ferritin 
 gma-u.5   FER2-1   ferritin 
 gma-u.5   100778273   ferritin-2, chloroplastic 
 mtr-u.5   11412329   ferritin-1, chloroplastic 
 mtr-u.5   11421063   ferritin-2, chloroplastic 
 mtr-u.5   11428040   ferritin-3, chloroplastic 
 ppo-u.5   7462089   ferritin-3, chloroplastic 
 ppo-u.5   7460396   ferritin, chloroplastic 
 ppo-u.5   7474413   ferritin-3, chloroplastic 
 ath-u.5   FER3   ferritin 3 
 ath-u.5   FER4   ferritin 4 
 ath-u.5   FER2   ferritin 2 
 vvi-u.5   100267235   ferritin-3, chloroplastic 
 sly-u.5   104647958   ferritin-1, chloroplastic 
 sly-u.5   101260346   ferritin-2, chloroplastic 
 osa-u.5   9269178   ferritin-1, chloroplastic 
 osa-u.5   4351264   ferritin-1, chloroplastic 
 zma-u.5   542392   ferritin homolog 2 
 zma-u.5   542553   ferritin 1 

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Top 50 coexpressed genes to SFERH-4 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to SFERH-4 (gma-u.5 coexpression data)

CoexMap"547477"


gmaSFERH-4 | Entrez gene ID : 547477      
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 5 3 3 3 1 2 2 2 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx00860 [list] [network] Porphyrin metabolism (98 genes)
GO BP
GO:0006826 [list] [network] iron ion transport  (18 genes)  IEA  
GO:0006879 [list] [network] intracellular iron ion homeostasis  (51 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (9233 genes)  IEA  
GO MF
GO:0008199 [list] [network] ferric iron binding  (23 genes)  IEA  
GO:0008198 [list] [network] ferrous iron binding  (37 genes)  IEA  
Protein NP_001237049.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 4  (predict for NP_001237049.1)
Subcellular
localization
TargetP
chlo 8  (predict for NP_001237049.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
SFERH-4

.
gma-r.7
for
SFERH-4

.
gma-m.5
for
SFERH-4

.
gma-u.5
for
FER2-1

.
gma-u.5
for
100778273

.
mtr-u.5
for
11412329

.
mtr-u.5
for
11421063

.
mtr-u.5
for
11428040

.
ppo-u.5
for
7462089

.
ppo-u.5
for
7460396

.
ppo-u.5
for
7474413

.
ath-u.5
for
FER3

.
ath-u.5
for
FER4

.
ath-u.5
for
FER2

.
vvi-u.5
for
100267235

.
sly-u.5
for
104647958

.
sly-u.5
for
101260346

.
osa-u.5
for
9269178

.
osa-u.5
for
4351264

.
zma-u.5
for
542392

.
zma-u.5
for
542553

.


Ortholog ID: 2022
Species ath ath sly sly osa osa zma zma bra bra vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit cit bdi nta nta
Symbol FER2 FER4 LOC104647958 LOC101260346 LOC4351264 LOC9269178 LOC542553 LOC542392 LOC103830031 LOC103855410 LOC100267235 LOC7468070 LOC7460396 LOC11412329 LOC11421063 LOC100270662 LOC100270663 LOC123448137 LOC123395254 LOC107937064 LOC107904058 LOC106352904 LOC106433816 CHLRE_09g387800v5 LOC110437661 LOC110435665 LOC102577492 LOC102581985 LOC102626899 LOC102615169 LOC100837024 LOC107801146 LOC107809228
Function* ferritin 2 ferritin 4 ferritin-1, chloroplastic ferritin-2, chloroplastic ferritin-1, chloroplastic ferritin-1, chloroplastic ferritin 1 ferritin homolog 2 ferritin-3, chloroplastic ferritin-1, chloroplastic ferritin-3, chloroplastic ferritin, chloroplastic ferritin, chloroplastic ferritin-1, chloroplastic ferritin-2, chloroplastic ferritin-1, chloroplastic ferritin-1, chloroplastic ferritin-1, chloroplastic-like ferritin-1, chloroplastic-like ferritin-3, chloroplastic ferritin-3, chloroplastic-like ferritin-3, chloroplastic ferritin-1, chloroplastic uncharacterized protein ferritin-1, chloroplastic ferritin-1, chloroplastic-like ferritin ferritin-2, chloroplastic-like ferritin-3, chloroplastic ferritin-3, chloroplastic ferritin-1, chloroplastic ferritin-1, chloroplastic-like ferritin-2, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00860 Porphyrin metabolism 5
ath00053 Ascorbate and aldarate metabolism 2
ath00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 5
sly00630 Glyoxylate and dicarboxylate metabolism 2
sly00710 Carbon fixation by Calvin cycle 2
sly04146 Peroxisome 2
sly00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03020 RNA polymerase 2
sly03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00860 Porphyrin metabolism 3
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00860 Porphyrin metabolism 2
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00860 Porphyrin metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00860 Porphyrin metabolism 5
vvi00010 Glycolysis / Gluconeogenesis 3
vvi00330 Arginine and proline metabolism 3
vvi01200 Carbon metabolism 3
vvi01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00860 Porphyrin metabolism 4
ppo00480 Glutathione metabolism 3
ppo02010 ABC transporters 2
ppo00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 4
ppo00860 Porphyrin metabolism 3
ppo02010 ABC transporters 2
ppo01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00860 Porphyrin metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00860 Porphyrin metabolism 4
mtr04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 2
ghi00240 Pyrimidine metabolism 2
ghi01232 Nucleotide metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00410 beta-Alanine metabolism 7
ghi00640 Propanoate metabolism 7
ghi00071 Fatty acid degradation 6
ghi01212 Fatty acid metabolism 6
ghi01200 Carbon metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 7
bna00010 Glycolysis / Gluconeogenesis 2
bna00620 Pyruvate metabolism 2
bna01200 Carbon metabolism 2
bna01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 7
bna00010 Glycolysis / Gluconeogenesis 2
bna00620 Pyruvate metabolism 2
bna01200 Carbon metabolism 2
bna01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 6
sbi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00860 Porphyrin metabolism 2
sbi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00860 Porphyrin metabolism 3
sot04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00860 Porphyrin metabolism 4
sot03008 Ribosome biogenesis in eukaryotes 3
sot03013 Nucleocytoplasmic transport 3
sot03250 Viral life cycle - HIV-1 3
sot04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00860 Porphyrin metabolism 2
cit01200 Carbon metabolism 2
cit00053 Ascorbate and aldarate metabolism 2
cit00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 3
cit00010 Glycolysis / Gluconeogenesis 2
cit00710 Carbon fixation by Calvin cycle 2
cit01230 Biosynthesis of amino acids 2
cit00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00030 Pentose phosphate pathway 2
nta00010 Glycolysis / Gluconeogenesis 2
nta00620 Pyruvate metabolism 2
nta01200 Carbon metabolism 2
nta01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 820276 818622 104647958 101260346 4351264 9269178 542553 542392 103830031 103855410 100267235 7468070 7460396 11412329 11421063 100270662 100270663 123448137 123395254 107937064 107904058 106352904 106433816 5720015 110437661 110435665 102577492 102581985 102626899 102615169 100837024 107801146 107809228
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