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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   DMT1   ferrous ion membrane transport protein DMT1 
 gma-r.7   DMT1   ferrous ion membrane transport protein DMT1 
 gma-m.5   DMT1   ferrous ion membrane transport protein DMT1 
 gma-u.5   NRAMP2A   metal transporter Nramp2a 
 gma-u.5   NRAMP3A   metal transporter Nramp3a 
 mtr-u.5   25493521   metal transporter Nramp3 
 mtr-u.5   25489927   metal transporter Nramp2 
 ppo-u.5   7472676   metal transporter Nramp2 
 ppo-u.5   18101156   metal transporter Nramp3 
 ppo-u.5   18101157   metal transporter Nramp3 
 ath-u.5   NRAMP3   natural resistance-associated macrophage protein 3 
 ath-u.5   NRAMP4   natural resistance associated macrophage protein 4 
 ath-u.5   NRAMP2   NRAMP metal ion transporter 2 
 vvi-u.5   100268041   metal transporter Nramp3.2 
 vvi-u.5   100262579   metal transporter Nramp2 
 sly-u.5   Nramp2   metal transporter Nramp2 
 sly-u.5   NRAMP3   metal transporter 
 osa-u.5   4352640   metal transporter Nramp6-like 
 osa-u.5   4333420   metal transporter Nramp6-like 
 osa-u.5   4332012   metal transporter Nramp2-like 
 zma-u.5   100383075   uncharacterized LOC100383075 
 zma-u.5   100283910   uncharacterized LOC100283910 

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Top 50 coexpressed genes to DMT1 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to DMT1 (gma-u.5 coexpression data)

CoexMap"547711"


gmaDMT1 | Entrez gene ID : 547711      
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 5 2 3 3 2 2 3 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx04142 [list] [network] Lysosome (152 genes)
GO BP
GO:2000379 [list] [network] positive regulation of reactive oxygen species metabolic process  (4 genes)  IEA  
GO:0042742 [list] [network] defense response to bacterium  (63 genes)  IEA  
GO:0030001 [list] [network] metal ion transport  (312 genes)  IEA  
GO CC
GO:0005774 [list] [network] vacuolar membrane  (193 genes)  IEA  
GO MF
GO:0015086 [list] [network] cadmium ion transmembrane transporter activity  (16 genes)  IEA  
GO:0005384 [list] [network] manganese ion transmembrane transporter activity  (49 genes)  IEA  
Protein NP_001236727.2 [sequence] [blastp]
Subcellular
localization
wolf
plas 9  (predict for NP_001236727.2)
Subcellular
localization
TargetP
other 9  (predict for NP_001236727.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
DMT1

.
gma-r.7
for
DMT1

.
gma-m.5
for
DMT1

.
gma-u.5
for
NRAMP2A

.
gma-u.5
for
NRAMP3A

.
mtr-u.5
for
25493521

.
mtr-u.5
for
25489927

.
ppo-u.5
for
7472676

.
ppo-u.5
for
18101156

.
ppo-u.5
for
18101157

.
ath-u.5
for
NRAMP3

.
ath-u.5
for
NRAMP4

.
ath-u.5
for
NRAMP2

.
vvi-u.5
for
100268041

.
vvi-u.5
for
100262579

.
sly-u.5
for
Nramp2

.
sly-u.5
for
NRAMP3

.
osa-u.5
for
4352640

.
osa-u.5
for
4333420

.
osa-u.5
for
4332012

.
zma-u.5
for
100383075

.
zma-u.5
for
100283910

.


Ortholog ID: 1485
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae hvu ghi ghi bna bna cre sbi sot sot cit cit bdi bdi nta nta
Symbol NRAMP4 NRAMP2 NRAMP3A NRAMP2A NRAMP3 Nramp2 LOC4333420 LOC4352640 LOC100283910 LOC100383075 LOC103829512 LOC103849582 LOC100268041 LOC100262579 LOC7472676 LOC18101156 LOC25489927 LOC25493521 LOC123119624 LOC123449372 LOC107931677 LOC107905619 LOC125584396 LOC106371864 CHLRE_05g248300v5 LOC8069691 LOC102602058 LOC102578842 LOC102621721 LOC102613637 LOC100845842 LOC100828548 LOC107798557 LOC107798562
Function* natural resistance associated macrophage protein 4 NRAMP metal ion transporter 2 metal transporter Nramp3a metal transporter Nramp2a metal transporter metal transporter Nramp2 metal transporter Nramp6-like metal transporter Nramp6-like uncharacterized LOC100283910 uncharacterized LOC100383075 metal transporter Nramp4 metal transporter Nramp2 metal transporter Nramp3.2 metal transporter Nramp2 metal transporter Nramp2 metal transporter Nramp3 metal transporter Nramp2 metal transporter Nramp3 metal transporter Nramp6 metal transporter Nramp2 metal transporter Nramp3 metal transporter Nramp2 metal transporter Nramp3-like metal transporter Nramp2 uncharacterized protein metal transporter Nramp6 metal transporter Nramp2-like metal transporter Nramp2-like metal transporter Nramp3 metal transporter Nramp2-like metal transporter Nramp2 metal transporter Nramp6 metal transporter Nramp2-like metal transporter Nramp3.2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00520 Amino sugar and nucleotide sugar metabolism 4
ath04142 Lysosome 2
ath01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00230 Purine metabolism 2
gma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04136 Autophagy - other 2
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00230 Purine metabolism 2
zma00240 Pyrimidine metabolism 2
zma01232 Nucleotide metabolism 2
zma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 6
bra04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04142 Lysosome 2
vvi00730 Thiamine metabolism 2
vvi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00270 Cysteine and methionine metabolism 3
vvi00710 Carbon fixation by Calvin cycle 3
vvi01200 Carbon metabolism 3
vvi00513 Various types of N-glycan biosynthesis 3
vvi04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03015 mRNA surveillance pathway 3
ppo04144 Endocytosis 3
ppo04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr02010 ABC transporters 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00740 Riboflavin metabolism 4
mtr01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 3
hvu04142 Lysosome 2
hvu04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04142 Lysosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 2
ghi04075 Plant hormone signal transduction 2
ghi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04142 Lysosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04142 Lysosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04081 Hormone signaling 2
cre00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04142 Lysosome 3
sot04144 Endocytosis 3
sot00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00051 Fructose and mannose metabolism 2
cit00500 Starch and sucrose metabolism 2
cit00520 Amino sugar and nucleotide sugar metabolism 2
cit01250 Biosynthesis of nucleotide sugars 2
cit04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03060 Protein export 2
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04142 Lysosome 2
nta00053 Ascorbate and aldarate metabolism 2
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01240 Biosynthesis of cofactors 2
nta01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04142 Lysosome 4
nta04136 Autophagy - other 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 836868 841127 100791117 100812381 544257 543927 4333420 4352640 100283910 100383075 103829512 103849582 100268041 100262579 7472676 18101156 25489927 25493521 123119624 123449372 107931677 107905619 125584396 106371864 66053512 8069691 102602058 102578842 102621721 102613637 100845842 100828548 107798557 107798562
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