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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   548020   ribonucleoside-diphosphate reductase large subunit 
 gma-r.7   548020   ribonucleoside-diphosphate reductase large subunit 
 gma-m.5   548020   ribonucleoside-diphosphate reductase large subunit 
 gma-u.5   547948   ribonucleotide reductase large subunit B 
 gma-u.5   100791639   ribonucleoside-diphosphate reductase large subunit 
 mtr-u.5   25488510   ribonucleoside-diphosphate reductase large subunit 
 mtr-u.5   11438405   ribonucleoside-diphosphate reductase large subunit 
 ppo-u.5   7469236   ribonucleoside-diphosphate reductase large subunit 
 ppo-u.5   7457154   ribonucleoside-diphosphate reductase large subunit 
 ppo-u.5   7486350   ribonucleoside-diphosphate reductase large subunit 
 ath-u.5   RNR1   ribonucleotide reductase 1 
 vvi-u.5   100261117   ribonucleoside-diphosphate reductase large subunit 
 sly-u.5   101249065   ribonucleoside-diphosphate reductase large subunit-like 
 sly-u.5   101263997   ribonucleoside-diphosphate reductase large subunit 
 osa-u.5   4331059   ribonucleoside-diphosphate reductase large subunit 
 osa-u.5   4340258   ribonucleoside-diphosphate reductase large subunit 
 zma-u.5   100502278   Ribonucleoside-diphosphate reductase 
 zma-u.5   110017794   uncharacterized LOC110017794 

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Top 50 coexpressed genes to 548020 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 548020 (gma-u.5 coexpression data)

CoexMap"548020"


gmaLOC548020 | Entrez gene ID : 548020      
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 5 2 3 1 1 2 2 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx00230 [list] [network] Purine metabolism (174 genes)
gmx00240 [list] [network] Pyrimidine metabolism (120 genes)
gmx00480 [list] [network] Glutathione metabolism (165 genes)
gmx01232 [list] [network] Nucleotide metabolism (148 genes)
GO BP
GO:0009263 [list] [network] deoxyribonucleotide biosynthetic process  (14 genes)  IEA  
GO:0006260 [list] [network] DNA replication  (274 genes)  IEA  
GO CC
GO:0005971 [list] [network] ribonucleoside-diphosphate reductase complex  (3 genes)  IEA  
GO MF
GO:0004748 [list] [network] ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor  (3 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (3753 genes)  IEA  
Protein NP_001237526.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 4,  cyto_nucl 4  (predict for NP_001237526.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001237526.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
548020

.
gma-r.7
for
548020

.
gma-m.5
for
548020

.
gma-u.5
for
547948

.
gma-u.5
for
100791639

.
mtr-u.5
for
25488510

.
mtr-u.5
for
11438405

.
ppo-u.5
for
7469236

.
ppo-u.5
for
7457154

.
ppo-u.5
for
7486350

.
ath-u.5
for
RNR1

.
vvi-u.5
for
100261117

.
sly-u.5
for
101249065

.
sly-u.5
for
101263997

.
osa-u.5
for
4331059

.
osa-u.5
for
4340258

.
zma-u.5
for
100502278

.
zma-u.5
for
110017794

.


Ortholog ID: 3427
Species ath gma gma sly sly osa osa zma zma bra bra vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol RNR1 LOC100791639 LOC547948 LOC101249065 LOC101263997 LOC4340258 LOC4331059 LOC110017794 LOC100502278 LOC103827773 LOC103847573 LOC100261117 LOC7457154 LOC7486350 LOC11438405 LOC25488510 LOC123156757 LOC123165206 LOC123401811 LOC123407082 LOC107950594 LOC107922452 LOC111208734 LOC111198774 CHLRE_12g492950v5 LOC8084665 LOC8070903 LOC102585367 LOC102602086 LOC102611797 LOC102612388 LOC100839518 LOC100844446 LOC107803584 LOC107807190
Function* ribonucleotide reductase 1 ribonucleoside-diphosphate reductase large subunit ribonucleotide reductase large subunit B ribonucleoside-diphosphate reductase large subunit-like ribonucleoside-diphosphate reductase large subunit ribonucleoside-diphosphate reductase large subunit ribonucleoside-diphosphate reductase large subunit uncharacterized LOC110017794 Ribonucleoside-diphosphate reductase ribonucleoside-diphosphate reductase large subunit ribonucleoside-diphosphate reductase large subunit ribonucleoside-diphosphate reductase large subunit ribonucleoside-diphosphate reductase large subunit ribonucleoside-diphosphate reductase large subunit ribonucleoside-diphosphate reductase large subunit ribonucleoside-diphosphate reductase large subunit ribonucleoside-diphosphate reductase large subunit ribonucleoside-diphosphate reductase large subunit ribonucleoside-diphosphate reductase large subunit ribonucleoside-diphosphate reductase large subunit-like ribonucleoside-diphosphate reductase large subunit ribonucleoside-diphosphate reductase large subunit ribonucleoside-diphosphate reductase large subunit ribonucleoside-diphosphate reductase large subunit uncharacterized protein ribonucleoside-diphosphate reductase large subunit ribonucleoside-diphosphate reductase large subunit ribonucleoside-diphosphate reductase large subunit-like ribonucleoside-diphosphate reductase large subunit ribonucleoside-diphosphate reductase large subunit-like ribonucleoside-diphosphate reductase large subunit ribonucleoside-diphosphate reductase large subunit ribonucleoside-diphosphate reductase large subunit ribonucleoside-diphosphate reductase large subunit ribonucleoside-diphosphate reductase large subunit-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 11
ath03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 5
gma03420 Nucleotide excision repair 4
gma03430 Mismatch repair 4
gma00240 Pyrimidine metabolism 4
gma01232 Nucleotide metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 4
gma03420 Nucleotide excision repair 2
gma03430 Mismatch repair 2
gma03440 Homologous recombination 2
gma00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03030 DNA replication 8
sly00240 Pyrimidine metabolism 3
sly01232 Nucleotide metabolism 3
sly03420 Nucleotide excision repair 2
sly03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00240 Pyrimidine metabolism 3
sly01232 Nucleotide metabolism 3
sly00230 Purine metabolism 2
sly00480 Glutathione metabolism 2
sly03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00240 Pyrimidine metabolism 5
osa01232 Nucleotide metabolism 5
osa00230 Purine metabolism 4
osa00480 Glutathione metabolism 4
osa03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00240 Pyrimidine metabolism 5
osa01232 Nucleotide metabolism 5
osa00230 Purine metabolism 4
osa00480 Glutathione metabolism 4
osa03030 DNA replication 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03030 DNA replication 11
zma00230 Purine metabolism 2
zma00240 Pyrimidine metabolism 2
zma00480 Glutathione metabolism 2
zma01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03030 DNA replication 5
zma00230 Purine metabolism 2
zma00240 Pyrimidine metabolism 2
zma00480 Glutathione metabolism 2
zma01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03030 DNA replication 4
bra04120 Ubiquitin mediated proteolysis 2
bra00230 Purine metabolism 2
bra00240 Pyrimidine metabolism 2
bra00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03030 DNA replication 7
vvi04814 Motor proteins 2
vvi03420 Nucleotide excision repair 2
vvi03430 Mismatch repair 2
vvi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03030 DNA replication 9
ppo00230 Purine metabolism 2
ppo00240 Pyrimidine metabolism 2
ppo00480 Glutathione metabolism 2
ppo01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03030 DNA replication 7
ppo00240 Pyrimidine metabolism 4
ppo01232 Nucleotide metabolism 4
ppo00230 Purine metabolism 3
ppo00480 Glutathione metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03030 DNA replication 10
mtr03440 Homologous recombination 3
mtr03460 Fanconi anemia pathway 2
mtr00230 Purine metabolism 2
mtr00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00230 Purine metabolism 5
mtr00240 Pyrimidine metabolism 5
mtr00480 Glutathione metabolism 5
mtr01232 Nucleotide metabolism 5
mtr03030 DNA replication 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 10
tae00230 Purine metabolism 6
tae00240 Pyrimidine metabolism 6
tae00480 Glutathione metabolism 6
tae01232 Nucleotide metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 9
tae00230 Purine metabolism 3
tae00240 Pyrimidine metabolism 3
tae00480 Glutathione metabolism 3
tae01232 Nucleotide metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00480 Glutathione metabolism 2
hvu01230 Biosynthesis of amino acids 2
hvu04146 Peroxisome 2
hvu00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 11
hvu03030 DNA replication 4
hvu04120 Ubiquitin mediated proteolysis 3
hvu03420 Nucleotide excision repair 2
hvu03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00240 Pyrimidine metabolism 7
ghi01232 Nucleotide metabolism 7
ghi00230 Purine metabolism 5
ghi00480 Glutathione metabolism 5
ghi03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00240 Pyrimidine metabolism 6
ghi01232 Nucleotide metabolism 6
ghi00230 Purine metabolism 4
ghi00480 Glutathione metabolism 4
ghi03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03440 Homologous recombination 4
bna03460 Fanconi anemia pathway 4
bna00230 Purine metabolism 4
bna00240 Pyrimidine metabolism 4
bna00480 Glutathione metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00240 Pyrimidine metabolism 5
bna01232 Nucleotide metabolism 5
bna03440 Homologous recombination 4
bna00230 Purine metabolism 4
bna00480 Glutathione metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03030 DNA replication 7
cre00240 Pyrimidine metabolism 3
cre03420 Nucleotide excision repair 2
cre03430 Mismatch repair 2
cre01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00240 Pyrimidine metabolism 3
sbi01232 Nucleotide metabolism 3
sbi03030 DNA replication 2
sbi00230 Purine metabolism 2
sbi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03030 DNA replication 5
sbi00240 Pyrimidine metabolism 3
sbi01232 Nucleotide metabolism 3
sbi00230 Purine metabolism 2
sbi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00230 Purine metabolism 2
sot00240 Pyrimidine metabolism 2
sot00480 Glutathione metabolism 2
sot01232 Nucleotide metabolism 2
sot03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03030 DNA replication 4
sot03420 Nucleotide excision repair 4
sot03430 Mismatch repair 4
sot03460 Fanconi anemia pathway 4
sot03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03030 DNA replication 8
cit04814 Motor proteins 2
cit00230 Purine metabolism 2
cit00240 Pyrimidine metabolism 2
cit00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03030 DNA replication 3
cit00230 Purine metabolism 2
cit00240 Pyrimidine metabolism 2
cit00480 Glutathione metabolism 2
cit01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00230 Purine metabolism 2
bdi00240 Pyrimidine metabolism 2
bdi00480 Glutathione metabolism 2
bdi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00230 Purine metabolism 2
bdi00240 Pyrimidine metabolism 2
bdi00480 Glutathione metabolism 2
bdi01232 Nucleotide metabolism 2
bdi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00240 Pyrimidine metabolism 7
nta01232 Nucleotide metabolism 7
nta00230 Purine metabolism 5
nta00480 Glutathione metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00240 Pyrimidine metabolism 6
nta01232 Nucleotide metabolism 6
nta00230 Purine metabolism 5
nta00480 Glutathione metabolism 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 816715 100791639 547948 101249065 101263997 4340258 4331059 110017794 100502278 103827773 103847573 100261117 7457154 7486350 11438405 25488510 123156757 123165206 123401811 123407082 107950594 107922452 111208734 111198774 5726125 8084665 8070903 102585367 102602086 102611797 102612388 100839518 100844446 107803584 107807190
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