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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_12g500900v5   uncharacterized protein 
 ath-u.5   SIZ1   DNA-binding protein with MIZ/SP-RING zinc finger, PHD-finger and SAP domain-containing protein 
 gma-u.5   100811996   E3 SUMO-protein ligase SIZ1 
 gma-u.5   100803144   E3 SUMO-protein ligase SIZ1 
 gma-u.5   SIZ1A   E3 SUMO-protein ligase SIZ1a 
 sly-u.5   101244877   E3 SUMO-protein ligase SIZ1-like 
 sly-u.5   SIZ1   E3 SUMO-protein ligase SIZ1 
 osa-u.5   4333925   E3 SUMO-protein ligase SIZ2-like 
 osa-u.5   4337672   E3 SUMO-protein ligase SIZ1-like 
 zma-u.5   103635939   E3 SUMO-protein ligase SIZ1 
 zma-u.5   103651650   E3 SUMO-protein ligase SIZ2 
 zma-u.5   100381570   uncharacterized LOC100381570 
 bra-r.6   103851505   E3 SUMO-protein ligase SIZ1 
 bra-r.6   103845461   E3 SUMO-protein ligase SIZ1 
 vvi-u.5   100258698   E3 SUMO-protein ligase SIZ1 
 ppo-u.5   7491127   E3 SUMO-protein ligase SIZ1 
 ppo-u.5   7458645   E3 SUMO-protein ligase SIZ1 
 ppo-u.5   7479894   E3 SUMO-protein ligase SIZ1 
 mtr-u.5   11417575   E3 SUMO-protein ligase SIZ1 
 mtr-u.5   11410046   E3 SUMO-protein ligase SIZ1 
 tae-r.2   123063754   E3 SUMO-protein ligase SIZ1 
 tae-r.2   123189169   E3 SUMO-protein ligase SIZ1 
 tae-r.2   123180218   E3 SUMO-protein ligase SIZ1 
 hvu-r.1   123448150   E3 SUMO-protein ligase SIZ2-like 
 hvu-r.1   123445763   E3 SUMO-protein ligase SIZ1-like 
 hvu-r.1   123408735   E3 SUMO-protein ligase SIZ1 
 ghi-r.1   107889158   E3 SUMO-protein ligase SIZ1 
 ghi-r.1   107942522   E3 SUMO-protein ligase SIZ1 
 ghi-r.1   107942801   E3 SUMO-protein ligase SIZ1 
 bna-r.1   106431741   E3 SUMO-protein ligase SIZ1 
 bna-r.1   106346503   E3 SUMO-protein ligase SIZ1 
 bna-r.1   106401501   E3 SUMO-protein ligase SIZ1 
 sbi-r.1   8072901   E3 SUMO-protein ligase SIZ2 
 sbi-r.1   8071254   E3 SUMO-protein ligase SIZ1 
 sbi-r.1   8079955   E3 SUMO-protein ligase SIZ2 
 sot-r.1   102599774   E3 SUMO-protein ligase SIZ1-like 
 sot-r.1   102600633   E3 SUMO-protein ligase SIZ1 
 cit-r.1   102611995   E3 SUMO-protein ligase SIZ1-like 
 cit-r.1   102614878   E3 SUMO-protein ligase SIZ1 
 bdi-r.1   100825860   E3 SUMO-protein ligase SIZ2 
 bdi-r.1   100832769   E3 SUMO-protein ligase SIZ1 
 nta-r.1   107764706   E3 SUMO-protein ligase SIZ1-like 
 nta-r.1   107785075   E3 SUMO-protein ligase SIZ1 
 nta-r.1   107796268   E3 SUMO-protein ligase SIZ1 

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Top 50 coexpressed genes to CHLRE_12g500900v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_12g500900v5 (cre-r.1 coexpression data)

CoexMap"5716385"


creCHLRE_12g500900v5 | Entrez gene ID : 5716385    
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 1 3 2 2 3 2 1 3 2 3 3 3 3 3 2 2 2 3
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016925 [list] [network] protein sumoylation  (15 genes)  IEA  
GO CC
GO MF
GO:0061665 [list] [network] SUMO ligase activity  (2 genes)  IEA  
GO:0008270 [list] [network] zinc ion binding  (213 genes)  IEA  
Protein XP_042918281.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 2,  plas 2,  mito_plas 2,  chlo 1,  E.R._plas 1,  cyto 1,  cyto_mito 1,  golg_plas 1,  cyto_pero 1  (predict for XP_042918281.1)
Subcellular
localization
TargetP
other 8  (predict for XP_042918281.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_12g500900v5
ath-u.5
for
SIZ1
gma-u.5
for
100811996
gma-u.5
for
100803144
gma-u.5
for
SIZ1A
sly-u.5
for
101244877
sly-u.5
for
SIZ1
osa-u.5
for
4333925
osa-u.5
for
4337672
zma-u.5
for
103635939
zma-u.5
for
103651650
zma-u.5
for
100381570
bra-r.6
for
103851505
bra-r.6
for
103845461
vvi-u.5
for
100258698
ppo-u.5
for
7491127
ppo-u.5
for
7458645
ppo-u.5
for
7479894
mtr-u.5
for
11417575
mtr-u.5
for
11410046
tae-r.2
for
123063754
tae-r.2
for
123189169
tae-r.2
for
123180218
hvu-r.1
for
123448150
hvu-r.1
for
123445763
hvu-r.1
for
123408735
ghi-r.1
for
107889158
ghi-r.1
for
107942522
ghi-r.1
for
107942801
bna-r.1
for
106431741
bna-r.1
for
106346503
bna-r.1
for
106401501
sbi-r.1
for
8072901
sbi-r.1
for
8071254
sbi-r.1
for
8079955
sot-r.1
for
102599774
sot-r.1
for
102600633
cit-r.1
for
102611995
cit-r.1
for
102614878
bdi-r.1
for
100825860
bdi-r.1
for
100832769
nta-r.1
for
107764706
nta-r.1
for
107785075
nta-r.1
for
107796268


Ortholog ID: 2243
Species cre ath gma gma gma sly sly osa osa zma zma zma bra bra vvi ppo ppo ppo mtr mtr tae tae tae hvu hvu hvu ghi ghi ghi bna bna bna sbi sbi sbi sot sot cit cit bdi bdi nta nta nta
Symbol CHLRE_12g500900v5 SIZ1 LOC100803144 SIZ1A SIZ1B LOC101244877 SIZ1 LOC4333925 LOC4337672 LOC103635939 LOC103651650 LOC100381570 LOC103851505 LOC103845461 LOC100258698 LOC7491127 LOC7458645 LOC18098189 LOC11417575 LOC11410046 LOC123086343 LOC123103233 LOC123111424 LOC123448150 LOC123445763 LOC123395108 LOC107889158 LOC107942522 LOC107889156 LOC106346503 LOC106401501 LOC106371605 LOC8072901 LOC8071254 LOC8079955 LOC102599774 LOC102600633 LOC102611995 LOC102614878 LOC100825860 LOC100832769 LOC107785075 LOC107796268 LOC107830557
Function* uncharacterized protein DNA-binding protein with MIZ/SP-RING zinc finger, PHD-finger and SAP domain-containing protein E3 SUMO-protein ligase SIZ1 E3 SUMO-protein ligase SIZ1a E3 SUMO-protein ligase SIZ1b E3 SUMO-protein ligase SIZ1-like E3 SUMO-protein ligase SIZ1 E3 SUMO-protein ligase SIZ2-like E3 SUMO-protein ligase SIZ1-like E3 SUMO-protein ligase SIZ1 E3 SUMO-protein ligase SIZ2 uncharacterized LOC100381570 E3 SUMO-protein ligase SIZ1 E3 SUMO-protein ligase SIZ1 E3 SUMO-protein ligase SIZ1 E3 SUMO-protein ligase SIZ1 E3 SUMO-protein ligase SIZ1 E3 SUMO-protein ligase SIZ1 E3 SUMO-protein ligase SIZ1 E3 SUMO-protein ligase SIZ1 E3 SUMO-protein ligase SIZ2 E3 SUMO-protein ligase SIZ2 E3 SUMO-protein ligase SIZ2 E3 SUMO-protein ligase SIZ2-like E3 SUMO-protein ligase SIZ1-like E3 SUMO-protein ligase SIZ2-like E3 SUMO-protein ligase SIZ1 E3 SUMO-protein ligase SIZ1 E3 SUMO-protein ligase SIZ1 E3 SUMO-protein ligase SIZ1 E3 SUMO-protein ligase SIZ1 E3 SUMO-protein ligase SIZ1 E3 SUMO-protein ligase SIZ2 E3 SUMO-protein ligase SIZ1 E3 SUMO-protein ligase SIZ2 E3 SUMO-protein ligase SIZ1-like E3 SUMO-protein ligase SIZ1 E3 SUMO-protein ligase SIZ1-like E3 SUMO-protein ligase SIZ1 E3 SUMO-protein ligase SIZ2 E3 SUMO-protein ligase SIZ1 E3 SUMO-protein ligase SIZ1 E3 SUMO-protein ligase SIZ1 E3 SUMO-protein ligase SIZ1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 3
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04136 Autophagy - other 3
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 2
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00310 Lysine degradation 3
tae03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae03015 mRNA surveillance pathway 3
tae03083 Polycomb repressive complex 3
tae03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03083 Polycomb repressive complex 4
tae03250 Viral life cycle - HIV-1 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
hvu03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00562 Inositol phosphate metabolism 3
bna04070 Phosphatidylinositol signaling system 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00562 Inositol phosphate metabolism 3
bna04070 Phosphatidylinositol signaling system 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00564 Glycerophospholipid metabolism 2
cit00565 Ether lipid metabolism 2
cit03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 4
cit03040 Spliceosome 3
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04136 Autophagy - other 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5716385 836163 100803144 100797252 100793735 101244877 101252253 4333925 4337672 103635939 103651650 100381570 103851505 103845461 100258698 7491127 7458645 18098189 11417575 11410046 123086343 123103233 123111424 123448150 123445763 123395108 107889158 107942522 107889156 106346503 106401501 106371605 8072901 8071254 8079955 102599774 102600633 102611995 102614878 100825860 100832769 107785075 107796268 107830557
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