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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_12g487500v5   uncharacterized protein 
 ath-u.5   AT4G11910   STAY-GREEN-like protein 
 ath-u.5   NYE1   non-yellowing 1 
 gma-u.5   100792871   magnesium dechelatase SGRL, chloroplastic 
 gma-u.5   100795181   protein SGR1-like 
 sly-u.5   101258237   protein STAY-GREEN homolog, chloroplastic-like 
 sly-u.5   101252980   magnesium dechelatase SGRL, chloroplastic 
 sly-u.5   SGR1   senescence-inducible chloroplast stay-green protein 1 
 osa-u.5   112938752   protein STAY-GREEN LIKE, chloroplastic 
 osa-u.5   4347672   protein STAY-GREEN, chloroplastic-like 
 zma-u.5   606426   senescence-inducible chloroplast stay-green protein 2 
 zma-u.5   100192013   Protein STAY-GREEN LIKE chloroplastic 
 zma-u.5   606425   senescence-inducible chloroplast stay-green protein 1 
 bra-r.6   103834271   magnesium dechelatase SGR1, chloroplastic 
 bra-r.6   103858612   magnesium dechelatase SGR2, chloroplastic 
 vvi-u.5   100265112   protein STAY-GREEN homolog, chloroplastic 
 vvi-u.5   100252353   magnesium dechelatase SGRL, chloroplastic 
 ppo-u.5   7478087   protein STAY-GREEN homolog, chloroplastic 
 ppo-u.5   7465829   protein STAY-GREEN homolog, chloroplastic 
 mtr-u.5   25489732   magnesium dechelatase SGRL, chloroplastic 
 mtr-u.5   11441009   protein STAY-GREEN, chloroplastic 
 tae-r.2   123191256   protein STAY-GREEN LIKE, chloroplastic 
 tae-r.2   123104541   protein STAY-GREEN, chloroplastic 
 tae-r.2   123055433   protein STAY-GREEN LIKE, chloroplastic 
 hvu-r.1   123400066   protein STAY-GREEN, chloroplastic-like 
 ghi-r.1   107910395   magnesium dechelatase SGRL, chloroplastic 
 ghi-r.1   107926912   protein STAY-GREEN homolog, chloroplastic 
 ghi-r.1   107929203   protein STAY-GREEN homolog, chloroplastic 
 bna-r.1   111197916   magnesium dechelatase SGR1, chloroplastic 
 bna-r.1   106440469   magnesium dechelatase SGR1, chloroplastic 
 sbi-r.1   8073690   protein STAY-GREEN LIKE, chloroplastic 
 sbi-r.1   8054896   protein STAY-GREEN, chloroplastic 
 sot-r.1   102586926   protein STAY-GREEN LIKE, chloroplastic 
 sot-r.1   102599319   protein STAY-GREEN, chloroplastic-like 
 sot-r.1   102597935   protein STAY-GREEN, chloroplastic-like 
 cit-r.1   102607042   magnesium dechelatase SGRL, chloroplastic 
 cit-r.1   102625350   protein STAY-GREEN 1, chloroplastic 
 bdi-r.1   100837300   protein STAY-GREEN, chloroplastic 
 bdi-r.1   100822302   protein STAY-GREEN LIKE, chloroplastic 
 nta-r.1   107824323   protein STAY-GREEN homolog, chloroplastic 
 nta-r.1   107763781   magnesium dechelatase SGRL, chloroplastic 

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Top 50 coexpressed genes to CHLRE_12g487500v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_12g487500v5 (cre-r.1 coexpression data)

CoexMap"5716647"


creCHLRE_12g487500v5 | Entrez gene ID : 5716647      
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 2 2 3 2 3 2 2 2 2 3 1 3 2 2 3 2 2 2
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_042918072.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  chlo_mito 4,  extr 1,  cysk 1  (predict for XP_042918072.1)
Subcellular
localization
TargetP
chlo 7,  mito 3  (predict for XP_042918072.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_12g487500v5
ath-u.5
for
AT4G11910
ath-u.5
for
NYE1
gma-u.5
for
100792871
gma-u.5
for
100795181
sly-u.5
for
101258237
sly-u.5
for
101252980
sly-u.5
for
SGR1
osa-u.5
for
112938752
osa-u.5
for
4347672
zma-u.5
for
606426
zma-u.5
for
100192013
zma-u.5
for
606425
bra-r.6
for
103834271
bra-r.6
for
103858612
vvi-u.5
for
100265112
vvi-u.5
for
100252353
ppo-u.5
for
7478087
ppo-u.5
for
7465829
mtr-u.5
for
25489732
mtr-u.5
for
11441009
tae-r.2
for
123191256
tae-r.2
for
123104541
tae-r.2
for
123055433
hvu-r.1
for
123400066
ghi-r.1
for
107910395
ghi-r.1
for
107926912
ghi-r.1
for
107929203
bna-r.1
for
111197916
bna-r.1
for
106440469
sbi-r.1
for
8073690
sbi-r.1
for
8054896
sot-r.1
for
102586926
sot-r.1
for
102599319
sot-r.1
for
102597935
cit-r.1
for
102607042
cit-r.1
for
102625350
bdi-r.1
for
100837300
bdi-r.1
for
100822302
nta-r.1
for
107824323
nta-r.1
for
107763781


Ortholog ID: 1713
Species cre ath ath gma gma sly sly sly osa osa zma zma zma bra bra vvi vvi ppo ppo ppo mtr mtr tae tae tae hvu ghi ghi ghi bna bna bna sbi sbi sot sot sot cit cit bdi bdi nta nta
Symbol CHLRE_12g487500v5 AT4G11910 AT1G44000 LOC100792871 LOC100795181 LOC101258237 LOC101252980 SGR1 LOC112938752 LOC4347672 LOC606426 LOC100192013 LOC606425 LOC103834271 LOC103861346 LOC100265112 LOC100252353 LOC7478087 LOC7465829 LOC18099608 LOC25489732 LOC11441009 LOC123104541 LOC123055433 LOC123175465 LOC123400066 LOC107929203 LOC107951459 LOC107963689 LOC106440469 LOC106375753 LOC106405908 LOC8073690 LOC8054896 LOC102586926 LOC102599319 LOC102597935 LOC102607042 LOC102625350 LOC100837300 LOC100822302 LOC107763781 LOC107804241
Function* uncharacterized protein STAY-GREEN-like protein STAY-GREEN-like protein magnesium dechelatase SGRL, chloroplastic protein SGR1-like protein STAY-GREEN homolog, chloroplastic-like magnesium dechelatase SGRL, chloroplastic senescence-inducible chloroplast stay-green protein 1 protein STAY-GREEN LIKE, chloroplastic protein STAY-GREEN, chloroplastic-like senescence-inducible chloroplast stay-green protein 2 Protein STAY-GREEN LIKE chloroplastic senescence-inducible chloroplast stay-green protein 1 magnesium dechelatase SGR1, chloroplastic magnesium dechelatase SGR1, chloroplastic protein STAY-GREEN homolog, chloroplastic magnesium dechelatase SGRL, chloroplastic protein STAY-GREEN homolog, chloroplastic protein STAY-GREEN homolog, chloroplastic magnesium dechelatase SGRL, chloroplastic magnesium dechelatase SGRL, chloroplastic protein STAY-GREEN, chloroplastic protein STAY-GREEN, chloroplastic protein STAY-GREEN LIKE, chloroplastic protein STAY-GREEN LIKE, chloroplastic protein STAY-GREEN, chloroplastic-like protein STAY-GREEN homolog, chloroplastic magnesium dechelatase SGRL, chloroplastic protein STAY-GREEN homolog, chloroplastic magnesium dechelatase SGR1, chloroplastic magnesium dechelatase SGR1, chloroplastic-like magnesium dechelatase SGR1, chloroplastic protein STAY-GREEN LIKE, chloroplastic protein STAY-GREEN, chloroplastic protein STAY-GREEN LIKE, chloroplastic protein STAY-GREEN, chloroplastic-like protein STAY-GREEN, chloroplastic-like magnesium dechelatase SGRL, chloroplastic protein STAY-GREEN 1, chloroplastic protein STAY-GREEN, chloroplastic protein STAY-GREEN LIKE, chloroplastic magnesium dechelatase SGRL, chloroplastic magnesium dechelatase SGRL, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00500 Starch and sucrose metabolism 4
ath00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00196 Photosynthesis - antenna proteins 10
gma00860 Porphyrin metabolism 2
gma00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00860 Porphyrin metabolism 4
gma01240 Biosynthesis of cofactors 3
gma00195 Photosynthesis 2
gma00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 8
sly00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04142 Lysosome 2
sly00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00860 Porphyrin metabolism 5
osa00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00860 Porphyrin metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00860 Porphyrin metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00630 Glyoxylate and dicarboxylate metabolism 3
bra01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00410 beta-Alanine metabolism 5
bra00770 Pantothenate and CoA biosynthesis 4
bra00240 Pyrimidine metabolism 3
bra00071 Fatty acid degradation 2
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00860 Porphyrin metabolism 4
vvi01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 4
ppo04016 MAPK signaling pathway - plant 3
ppo00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 4
ppo00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00196 Photosynthesis - antenna proteins 4
mtr00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 2
ghi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 6
ghi00190 Oxidative phosphorylation 2
ghi00480 Glutathione metabolism 2
ghi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 2
ghi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 10
bna04016 MAPK signaling pathway - plant 2
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 8
bna04016 MAPK signaling pathway - plant 2
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 7
bna04016 MAPK signaling pathway - plant 2
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00710 Carbon fixation by Calvin cycle 2
sbi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 10
sot00196 Photosynthesis - antenna proteins 6
sot00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 6
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00860 Porphyrin metabolism 4
bdi00196 Photosynthesis - antenna proteins 2
bdi00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 8
nta00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 8
nta00900 Terpenoid backbone biosynthesis 2
nta00630 Glyoxylate and dicarboxylate metabolism 2
nta00670 One carbon pool by folate 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5716647 826798 841000 100792871 100795181 101258237 101252980 778212 112938752 4347672 606426 100192013 606425 103834271 103861346 100265112 100252353 7478087 7465829 18099608 25489732 11441009 123104541 123055433 123175465 123400066 107929203 107951459 107963689 106440469 106375753 106405908 8073690 8054896 102586926 102599319 102597935 102607042 102625350 100837300 100822302 107763781 107804241
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