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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7465829   protein STAY-GREEN homolog, chloroplastic 
 ppo-r.4   7465829   protein STAY-GREEN homolog, chloroplastic 
 ppo-m.4   7465829   protein STAY-GREEN homolog, chloroplastic 
 ppo-u.5   7478087   protein STAY-GREEN homolog, chloroplastic 
 ppo-u.5   18099608   magnesium dechelatase SGRL, chloroplastic 
 gma-u.5   100795181   protein SGR1-like 
 gma-u.5   100792871   magnesium dechelatase SGRL, chloroplastic 
 mtr-u.5   25489732   magnesium dechelatase SGRL, chloroplastic 
 mtr-u.5   11441009   protein STAY-GREEN, chloroplastic 
 ath-u.5   NYE1   non-yellowing 1 
 ath-u.5   AT1G44000   STAY-GREEN-like protein 
 bra-r.6   103861346   magnesium dechelatase SGR1, chloroplastic 
 bra-r.6   103834271   magnesium dechelatase SGR1, chloroplastic 
 vvi-u.5   100265112   protein STAY-GREEN homolog, chloroplastic 
 vvi-u.5   100252353   magnesium dechelatase SGRL, chloroplastic 
 ghi-r.1   107910395   magnesium dechelatase SGRL, chloroplastic 
 ghi-r.1   107926912   protein STAY-GREEN homolog, chloroplastic 
 ghi-r.1   107929203   protein STAY-GREEN homolog, chloroplastic 
 bna-r.1   106388569   protein STAY-GREEN 2, chloroplastic-like 
 bna-r.1   106438786   magnesium dechelatase SGR2, chloroplastic 
 bna-r.1   111197916   magnesium dechelatase SGR1, chloroplastic 
 cit-r.1   102625350   protein STAY-GREEN 1, chloroplastic 
 cit-r.1   102607042   magnesium dechelatase SGRL, chloroplastic 
 sly-u.5   SGR1   senescence-inducible chloroplast stay-green protein 1 
 sly-u.5   101252980   magnesium dechelatase SGRL, chloroplastic 
 sly-u.5   101258237   protein STAY-GREEN homolog, chloroplastic-like 
 sot-r.1   102586926   protein STAY-GREEN LIKE, chloroplastic 
 sot-r.1   102599319   protein STAY-GREEN, chloroplastic-like 
 sot-r.1   102597935   protein STAY-GREEN, chloroplastic-like 
 nta-r.1   107824323   protein STAY-GREEN homolog, chloroplastic 
 nta-r.1   107819767   protein STAY-GREEN homolog, chloroplastic 
 osa-u.5   112938752   protein STAY-GREEN LIKE, chloroplastic 
 osa-u.5   4347672   protein STAY-GREEN, chloroplastic-like 
 zma-u.5   606426   senescence-inducible chloroplast stay-green protein 2 
 zma-u.5   100192013   Protein STAY-GREEN LIKE chloroplastic 
 zma-u.5   606425   senescence-inducible chloroplast stay-green protein 1 
 tae-r.2   123104541   protein STAY-GREEN, chloroplastic 
 tae-r.2   123191256   protein STAY-GREEN LIKE, chloroplastic 
 tae-r.2   123175465   protein STAY-GREEN LIKE, chloroplastic 
 hvu-r.1   123400066   protein STAY-GREEN, chloroplastic-like 
 sbi-r.1   8073690   protein STAY-GREEN LIKE, chloroplastic 
 sbi-r.1   8054896   protein STAY-GREEN, chloroplastic 
 bdi-r.1   100837300   protein STAY-GREEN, chloroplastic 
 bdi-r.1   100822302   protein STAY-GREEN LIKE, chloroplastic 
 cre-r.1   CHLRE_12g487500v5   uncharacterized protein 

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Top 50 coexpressed genes to 7465829 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7465829 (ppo-u.5 coexpression data)

CoexMap"7465829"


ppoLOC7465829 | Entrez gene ID : 7465829    
Species ppo gma mtr ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 5 2 2 2 2 2 3 3 2 3 3 2 2 3 3 1 2 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop00860 [list] [network] Porphyrin metabolism (65 genes)
GO BP
GO CC
GO MF
Protein XP_052307239.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  chlo 4  (predict for XP_052307239.1)
Subcellular
localization
TargetP
chlo 7  (predict for XP_052307239.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7465829
ppo-r.4
for
7465829
ppo-m.4
for
7465829
ppo-u.5
for
7478087
ppo-u.5
for
18099608
gma-u.5
for
100795181
gma-u.5
for
100792871
mtr-u.5
for
25489732
mtr-u.5
for
11441009
ath-u.5
for
NYE1
ath-u.5
for
AT1G44000
bra-r.6
for
103861346
bra-r.6
for
103834271
vvi-u.5
for
100265112
vvi-u.5
for
100252353
ghi-r.1
for
107910395
ghi-r.1
for
107926912
ghi-r.1
for
107929203
bna-r.1
for
106388569
bna-r.1
for
106438786
bna-r.1
for
111197916
cit-r.1
for
102625350
cit-r.1
for
102607042
sly-u.5
for
SGR1
sly-u.5
for
101252980
sly-u.5
for
101258237
sot-r.1
for
102586926
sot-r.1
for
102599319
sot-r.1
for
102597935
nta-r.1
for
107824323
nta-r.1
for
107819767
osa-u.5
for
112938752
osa-u.5
for
4347672
zma-u.5
for
606426
zma-u.5
for
100192013
zma-u.5
for
606425
tae-r.2
for
123104541
tae-r.2
for
123191256
tae-r.2
for
123175465
hvu-r.1
for
123400066
sbi-r.1
for
8073690
sbi-r.1
for
8054896
bdi-r.1
for
100837300
bdi-r.1
for
100822302
cre-r.1
for
CHLRE_12g487500v5


Ortholog ID: 1713
Species ppo ppo ppo gma gma mtr mtr ath ath bra bra vvi vvi ghi ghi ghi bna bna bna cit cit sly sly sly sot sot sot nta nta osa osa zma zma zma tae tae tae hvu sbi sbi bdi bdi cre
Symbol LOC7465829 LOC7478087 LOC18099608 LOC100795181 LOC100792871 LOC25489732 LOC11441009 AT1G44000 AT4G11910 LOC103861346 LOC103834271 LOC100265112 LOC100252353 LOC107929203 LOC107951459 LOC107963689 LOC106375753 LOC106405908 LOC106440469 LOC102625350 LOC102607042 SGR1 LOC101252980 LOC101258237 LOC102586926 LOC102599319 LOC102597935 LOC107763781 LOC107804241 LOC112938752 LOC4347672 LOC606426 LOC100192013 LOC606425 LOC123104541 LOC123175465 LOC123055433 LOC123400066 LOC8073690 LOC8054896 LOC100837300 LOC100822302 CHLRE_12g487500v5
Function* protein STAY-GREEN homolog, chloroplastic protein STAY-GREEN homolog, chloroplastic magnesium dechelatase SGRL, chloroplastic protein SGR1-like magnesium dechelatase SGRL, chloroplastic magnesium dechelatase SGRL, chloroplastic protein STAY-GREEN, chloroplastic STAY-GREEN-like protein STAY-GREEN-like protein magnesium dechelatase SGR1, chloroplastic magnesium dechelatase SGR1, chloroplastic protein STAY-GREEN homolog, chloroplastic magnesium dechelatase SGRL, chloroplastic protein STAY-GREEN homolog, chloroplastic magnesium dechelatase SGRL, chloroplastic protein STAY-GREEN homolog, chloroplastic magnesium dechelatase SGR1, chloroplastic-like magnesium dechelatase SGR1, chloroplastic magnesium dechelatase SGR1, chloroplastic protein STAY-GREEN 1, chloroplastic magnesium dechelatase SGRL, chloroplastic senescence-inducible chloroplast stay-green protein 1 magnesium dechelatase SGRL, chloroplastic protein STAY-GREEN homolog, chloroplastic-like protein STAY-GREEN LIKE, chloroplastic protein STAY-GREEN, chloroplastic-like protein STAY-GREEN, chloroplastic-like magnesium dechelatase SGRL, chloroplastic magnesium dechelatase SGRL, chloroplastic-like protein STAY-GREEN LIKE, chloroplastic protein STAY-GREEN, chloroplastic-like senescence-inducible chloroplast stay-green protein 2 Protein STAY-GREEN LIKE chloroplastic senescence-inducible chloroplast stay-green protein 1 protein STAY-GREEN, chloroplastic protein STAY-GREEN LIKE, chloroplastic protein STAY-GREEN LIKE, chloroplastic protein STAY-GREEN, chloroplastic-like protein STAY-GREEN LIKE, chloroplastic protein STAY-GREEN, chloroplastic protein STAY-GREEN, chloroplastic protein STAY-GREEN LIKE, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 4
ppo04016 MAPK signaling pathway - plant 3
ppo00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 4
ppo00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00860 Porphyrin metabolism 4
gma01240 Biosynthesis of cofactors 3
gma00195 Photosynthesis 2
gma00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00196 Photosynthesis - antenna proteins 10
gma00860 Porphyrin metabolism 2
gma00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00196 Photosynthesis - antenna proteins 4
mtr00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00500 Starch and sucrose metabolism 4
ath00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00410 beta-Alanine metabolism 5
bra00770 Pantothenate and CoA biosynthesis 4
bra00240 Pyrimidine metabolism 3
bra00071 Fatty acid degradation 2
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00630 Glyoxylate and dicarboxylate metabolism 3
bra01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00860 Porphyrin metabolism 4
vvi01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 2
ghi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 6
ghi00190 Oxidative phosphorylation 2
ghi00480 Glutathione metabolism 2
ghi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 2
ghi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 8
bna04016 MAPK signaling pathway - plant 2
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 7
bna04016 MAPK signaling pathway - plant 2
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 10
bna04016 MAPK signaling pathway - plant 2
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04142 Lysosome 2
sly00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 8
sly00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 10
sot00196 Photosynthesis - antenna proteins 6
sot00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 6
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 8
nta00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 8
nta00900 Terpenoid backbone biosynthesis 2
nta00630 Glyoxylate and dicarboxylate metabolism 2
nta00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00860 Porphyrin metabolism 5
osa00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00860 Porphyrin metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00860 Porphyrin metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00710 Carbon fixation by Calvin cycle 2
sbi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00860 Porphyrin metabolism 4
bdi00196 Photosynthesis - antenna proteins 2
bdi00900 Terpenoid backbone biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 7465829 7478087 18099608 100795181 100792871 25489732 11441009 841000 826798 103861346 103834271 100265112 100252353 107929203 107951459 107963689 106375753 106405908 106440469 102625350 102607042 778212 101252980 101258237 102586926 102599319 102597935 107763781 107804241 112938752 4347672 606426 100192013 606425 123104541 123175465 123055433 123400066 8073690 8054896 100837300 100822302 5716647
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