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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_04g221350v5   uncharacterized protein 
 ath-u.5   AT5G09390   CD2-binding protein-like protein 
 gma-u.5   100788722   CD2 antigen cytoplasmic tail-binding protein 2 
 gma-u.5   100306321   CD2 antigen cytoplasmic tail-binding protein 2 homolog 
 sly-u.5   101266113   uncharacterized LOC101266113 
 osa-u.5   4346897   uncharacterized LOC4346897 
 zma-u.5   100276763   CD2-binding protein-related 
 vvi-u.5   100259875   uncharacterized LOC100259875 
 ppo-u.5   7478146   SUPPRESSOR OF ABI3-5 
 ppo-u.5   7473023   uncharacterized LOC7473023 
 mtr-u.5   11428533   CD2 antigen cytoplasmic tail-binding protein 2 
 mtr-u.5   11415524   CD2 antigen cytoplasmic tail-binding protein 2 

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Top 50 coexpressed genes to CHLRE_04g221350v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_04g221350v5 (cre-r.1 coexpression data)

CoexMap"5717753"


creCHLRE_04g221350v5 | Entrez gene ID : 5717753    
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 1 2 1 1 1 1 2 2 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005682 [list] [network] U5 snRNP  (11 genes)  IEA  
GO MF
Protein XP_042925257.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  cyto 1  (predict for XP_042925257.1)
Subcellular
localization
TargetP
other 9  (predict for XP_042925257.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_04g221350v5

.
ath-u.5
for
AT5G09390

.
gma-u.5
for
100788722

.
gma-u.5
for
100306321

.
sly-u.5
for
101266113

.
osa-u.5
for
4346897

.
zma-u.5
for
100276763

.
vvi-u.5
for
100259875

.
ppo-u.5
for
7478146

.
ppo-u.5
for
7473023

.
mtr-u.5
for
11428533

.
mtr-u.5
for
11415524

.


Ortholog ID: 7322
Species ath gma gma sly osa zma bra vvi ppo ppo mtr mtr tae hvu ghi ghi bna bna cre cre sbi sot cit bdi nta nta
Symbol AT5G09390 LOC100306321 LOC100788722 LOC101266113 LOC4346897 LOC100276763 LOC103847204 LOC100259875 LOC7473023 LOC7478146 LOC11428533 LOC11415524 LOC123103617 LOC123395505 LOC107948605 LOC121214818 LOC106419348 LOC106440379 CHLRE_06g299450v5 CHLRE_04g221350v5 LOC8065378 LOC102588834 LOC102630974 LOC100831765 LOC107759438 LOC107809699
Function* CD2-binding protein-like protein CD2 antigen cytoplasmic tail-binding protein 2 homolog CD2 antigen cytoplasmic tail-binding protein 2 uncharacterized LOC101266113 uncharacterized LOC4346897 CD2-binding protein-related protein LIN1 uncharacterized LOC100259875 uncharacterized LOC7473023 SUPPRESSOR OF ABI3-5 CD2 antigen cytoplasmic tail-binding protein 2 CD2 antigen cytoplasmic tail-binding protein 2 CD2 antigen cytoplasmic tail-binding protein 2 CD2 antigen cytoplasmic tail-binding protein 2 CD2 antigen cytoplasmic tail-binding protein 2 homolog SUPPRESSOR OF ABI3-5 protein LIN1 protein LIN1 uncharacterized protein uncharacterized protein uncharacterized LOC8065378 CD2 antigen cytoplasmic tail-binding protein 2 uncharacterized LOC102630974 CD2 antigen cytoplasmic tail-binding protein 2 uncharacterized LOC107759438 uncharacterized LOC107809699
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 9
gma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 3
gma03022 Basal transcription factors 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 4
osa03013 Nucleocytoplasmic transport 2
osa03015 mRNA surveillance pathway 2
osa03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 3
zma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03022 Basal transcription factors 2
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 5
mtr03272 Virion - Hepatitis viruses 2
mtr04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 3
ghi04016 MAPK signaling pathway - plant 2
ghi04070 Phosphatidylinositol signaling system 2
ghi04075 Plant hormone signal transduction 2
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 3
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
nta04142 Lysosome 2
nta00770 Pantothenate and CoA biosynthesis 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
nta03050 Proteasome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 830798 100306321 100788722 101266113 4346897 100276763 103847204 100259875 7473023 7478146 11428533 11415524 123103617 123395505 107948605 121214818 106419348 106440379 66053844 5717753 8065378 102588834 102630974 100831765 107759438 107809699
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