ATTED-II : GeneCoexpression result

Species	Gene	Description
cre-r.1	CHLRE_06g299450v5	uncharacterized protein
cre-r.1	CHLRE_04g221350v5	uncharacterized protein
ath-u.5	AT5G09390	CD2-binding protein-like protein
gma-u.5	100788722	CD2 antigen cytoplasmic tail-binding protein 2
gma-u.5	100306321	CD2 antigen cytoplasmic tail-binding protein 2 homolog
sly-u.5	101266113	uncharacterized LOC101266113
osa-u.5	4346897	uncharacterized LOC4346897
zma-u.5	100276763	CD2-binding protein-related
bra-r.6	103847204	protein LIN1
vvi-u.5	100259875	uncharacterized LOC100259875
ppo-u.5	7478146	SUPPRESSOR OF ABI3-5
ppo-u.5	7473023	uncharacterized LOC7473023
mtr-u.5	11428533	CD2 antigen cytoplasmic tail-binding protein 2
mtr-u.5	11415524	CD2 antigen cytoplasmic tail-binding protein 2
tae-r.2	123121392	CD2 antigen cytoplasmic tail-binding protein 2
tae-r.2	123111832	CD2 antigen cytoplasmic tail-binding protein 2
hvu-r.1	123395505	CD2 antigen cytoplasmic tail-binding protein 2
ghi-r.1	121214818	SUPPRESSOR OF ABI3-5
ghi-r.1	107948605	CD2 antigen cytoplasmic tail-binding protein 2 homolog
ghi-r.1	107920519	SUPPRESSOR OF ABI3-5
bna-r.1	106440379	protein LIN1
bna-r.1	106419348	protein LIN1
sbi-r.1	8065378	uncharacterized LOC8065378
sot-r.1	102588834	CD2 antigen cytoplasmic tail-binding protein 2
cit-r.1	102630974	uncharacterized LOC102630974
bdi-r.1	100831765	CD2 antigen cytoplasmic tail-binding protein 2
nta-r.1	107809699	uncharacterized LOC107809699
nta-r.1	107759438	uncharacterized LOC107759438

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005682 [list] [network] U5 snRNP

(11 genes)

IEA

GO MF

Protein

XP_042924275.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 6, cyto 2, mito 1

(predict for XP_042924275.1)

Subcellular
localization
TargetP

other 8

(predict for XP_042924275.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	cre-r.1 for CHLRE_06g299450v5	cre-r.1 for CHLRE_04g221350v5	ath-u.5 for AT5G09390	gma-u.5 for 100788722	gma-u.5 for 100306321	sly-u.5 for 101266113	osa-u.5 for 4346897	zma-u.5 for 100276763	bra-r.6 for 103847204	vvi-u.5 for 100259875	ppo-u.5 for 7478146	ppo-u.5 for 7473023	mtr-u.5 for 11428533	mtr-u.5 for 11415524	tae-r.2 for 123121392	tae-r.2 for 123111832	hvu-r.1 for 123395505	ghi-r.1 for 121214818	ghi-r.1 for 107948605	ghi-r.1 for 107920519	bna-r.1 for 106440379	bna-r.1 for 106419348	sbi-r.1 for 8065378	sot-r.1 for 102588834	cit-r.1 for 102630974	bdi-r.1 for 100831765	nta-r.1 for 107809699	nta-r.1 for 107759438

Ortholog

Ortholog ID: 7322

Species

cre

ath

gma

sly

osa

zma

bra

vvi

ppo

mtr

tae

hvu

ghi

bna

sbi

sot

cit

bdi

nta

Symbol

Function^*

uncharacterized protein

CD2-binding protein-like protein

CD2 antigen cytoplasmic tail-binding protein 2

CD2 antigen cytoplasmic tail-binding protein 2 homolog

uncharacterized LOC101266113

uncharacterized LOC4346897

CD2-binding protein-related

protein LIN1

uncharacterized LOC100259875

SUPPRESSOR OF ABI3-5

uncharacterized LOC7473023

CD2 antigen cytoplasmic tail-binding protein 2

SUPPRESSOR OF ABI3-5

CD2 antigen cytoplasmic tail-binding protein 2 homolog

SUPPRESSOR OF ABI3-5

protein LIN1

uncharacterized LOC8065378

CD2 antigen cytoplasmic tail-binding protein 2

uncharacterized LOC102630974

CD2 antigen cytoplasmic tail-binding protein 2

uncharacterized LOC107809699

uncharacterized LOC107759438

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03082	ATP-dependent chromatin remodeling	3
gma03022	Basal transcription factors	2
gma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	9
gma03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03040	Spliceosome	4
osa03013	Nucleocytoplasmic transport	2
osa03015	mRNA surveillance pathway	2
osa03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03040	Spliceosome	3
zma03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03022	Basal transcription factors	2
ppo03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03040	Spliceosome	5
mtr03272	Virion - Hepatitis viruses	2
mtr04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04144	Endocytosis	2
ghi03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04144	Endocytosis	3
ghi04016	MAPK signaling pathway - plant	2
ghi04070	Phosphatidylinositol signaling system	2
ghi04075	Plant hormone signal transduction	2
ghi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04144	Endocytosis	3
bna03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	3
nta03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	3
nta04142	Lysosome	2
nta00770	Pantothenate and CoA biosynthesis	2
nta01240	Biosynthesis of cofactors	2

Expression

Expression pattern

Entrez Gene ID^*

66053844

5717753

830798

100788722

100306321

101266113

4346897

100276763

103847204

100259875

7478146

7473023

11428533

11415524

123111832

123103617

123395505

121214818

107948605

107920519

106440379

106419348

8065378

102588834

102630974

100831765

107809699

107759438

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to CHLRE_06g299450v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_06g299450v5 (cre-r.1 coexpression data)


Species	cre	ath	gma	sly	osa	zma	bra	vvi	ppo	mtr	tae	hvu	ghi	bna	sbi	sot	cit	bdi	nta
Paralog	2	1	2	1	1	1	1	1	2	2	2	1	3	2	1	1	1	1	2

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to CHLRE_06g299450v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_06g299450v5 (cre-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**