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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_13g567700v5   uncharacterized protein 
 ath-u.5   HTA8   histone H2A 8 
 ath-u.5   HTA11   histone H2A 11 
 ath-u.5   HTA9   histone H2A protein 9 
 gma-u.5   100782374   histone H2A variant 1 
 gma-u.5   100807862   histone H2A variant 1 
 gma-u.5   100306322   putative histone H2A 
 sly-u.5   101256783   probable histone H2A variant 1 
 sly-u.5   101268740   probable histone H2A variant 3 
 sly-u.5   101267931   probable histone H2A variant 1 
 osa-u.5   4348638   probable histone H2A variant 2 
 osa-u.5   4334071   probable histone H2A variant 3 
 osa-u.5   4331710   probable histone H2A variant 1 
 zma-u.5   100273753   Histone H2A 
 zma-u.5   103643659   probable histone H2A 
 vvi-u.5   100257988   histone H2A variant 1 
 vvi-u.5   100249276   probable histone H2A variant 3 
 vvi-u.5   100265256   probable histone H2A variant 3 
 ppo-u.5   18096145   histone H2A variant 1 
 ppo-u.5   7454316   histone H2A variant 1 
 ppo-u.5   18107499   probable histone H2A variant 3 
 mtr-u.5   11421897   histone H2A variant 1 
 mtr-u.5   11429815   probable histone H2A variant 3 
 mtr-u.5   11442215   probable histone H2A variant 3 

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Top 50 coexpressed genes to CHLRE_13g567700v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_13g567700v5 (cre-r.1 coexpression data)

CoexMap"5719077"


creCHLRE_13g567700v5 | Entrez gene ID : 5719077      
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 3 3 3 3 2 3 3 3 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cre03082 [list] [network] ATP-dependent chromatin remodeling (49 genes)
GO BP
GO CC
GO:0000786 [list] [network] nucleosome  (129 genes)  IEA  
GO MF
GO:0030527 [list] [network] structural constituent of chromatin  (130 genes)  IEA  
GO:0046982 [list] [network] protein heterodimerization activity  (139 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (670 genes)  IEA  
Protein XP_001693700.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  cyto 1,  mito 1  (predict for XP_001693700.1)
Subcellular
localization
TargetP
other 8  (predict for XP_001693700.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_13g567700v5

.
ath-u.5
for
HTA8

.
ath-u.5
for
HTA11

.
ath-u.5
for
HTA9

.
gma-u.5
for
100782374

.
gma-u.5
for
100807862

.
gma-u.5
for
100306322

.
sly-u.5
for
101256783

.
sly-u.5
for
101268740

.
sly-u.5
for
101267931

.
osa-u.5
for
4348638

.
osa-u.5
for
4334071

.
osa-u.5
for
4331710

.
zma-u.5
for
100273753

.
zma-u.5
for
103643659

.
vvi-u.5
for
100257988

.
vvi-u.5
for
100249276

.
vvi-u.5
for
100265256

.
ppo-u.5
for
18096145

.
ppo-u.5
for
7454316

.
ppo-u.5
for
18107499

.
mtr-u.5
for
11421897

.
mtr-u.5
for
11429815

.
mtr-u.5
for
11442215

.


Ortholog ID: 793
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sot sot cit cit bdi bdi nta nta
Symbol HTA8 HTA11 LOC100796183 LOC100499998 LOC101268740 LOC101256783 LOC4331710 LOC4348638 LOC103643659 LOC100216638 LOC103868480 LOC103841363 LOC100265256 LOC100249276 LOC18096145 LOC7495754 LOC11442215 LOC11431267 LOC123113275 LOC123122788 LOC123452177 LOC123429101 LOC107941646 LOC107955482 LOC106402324 LOC106407449 CHLRE_13g567700v5 LOC110431421 LOC102591023 LOC102581303 LOC102620198 LOC102610066 LOC100824636 LOC100826987 LOC107771657 LOC107781461
Function* histone H2A 8 histone H2A 11 histone H2A variant 1 uncharacterized LOC100499998 probable histone H2A variant 3 probable histone H2A variant 1 probable histone H2A variant 1 probable histone H2A variant 2 probable histone H2A uncharacterized LOC100216638 probable histone H2A variant 3 histone H2A variant 1 probable histone H2A variant 3 probable histone H2A variant 3 histone H2A variant 1 probable histone H2A variant 3 probable histone H2A variant 3 histone H2A variant 1 probable histone H2A variant 3 probable histone H2A variant 3 probable histone H2A variant 3 probable histone H2A variant 2 histone H2A variant 1 histone H2A variant 1 probable histone H2A variant 3 histone H2A variant 1 uncharacterized protein probable histone H2A variant 3 probable histone H2A variant 1 probable histone H2A variant 3 probable histone H2A variant 3 probable histone H2A variant 3 probable histone H2A variant 3 probable histone H2A variant 2 putative histone H2A variant 3 putative histone H2A variant 3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03082 ATP-dependent chromatin remodeling 5
ath03030 DNA replication 4
ath03410 Base excision repair 2
ath03420 Nucleotide excision repair 2
ath03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 4
gma03082 ATP-dependent chromatin remodeling 2
gma03410 Base excision repair 2
gma03420 Nucleotide excision repair 2
gma03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 4
gma04016 MAPK signaling pathway - plant 3
gma04070 Phosphatidylinositol signaling system 3
gma04075 Plant hormone signal transduction 3
gma04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 3
sly04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 3
osa00230 Purine metabolism 2
osa00240 Pyrimidine metabolism 2
osa00480 Glutathione metabolism 2
osa01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 6
zma04814 Motor proteins 3
zma03082 ATP-dependent chromatin remodeling 3
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 3
bra03013 Nucleocytoplasmic transport 2
bra03015 mRNA surveillance pathway 2
bra03040 Spliceosome 2
bra03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03030 DNA replication 2
bra03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04130 SNARE interactions in vesicular transport 4
vvi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 3
ppo04814 Motor proteins 3
ppo04145 Phagosome 2
ppo04517 IgSF CAM signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 14
ppo03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 4
mtr00190 Oxidative phosphorylation 3
mtr03020 RNA polymerase 2
mtr03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 4
tae03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00190 Oxidative phosphorylation 2
hvu04145 Phagosome 2
hvu03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 11
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 7
bna03050 Proteasome 2
bna00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04016 MAPK signaling pathway - plant 3
sbi04070 Phosphatidylinositol signaling system 3
sbi04075 Plant hormone signal transduction 3
sbi04626 Plant-pathogen interaction 3
sbi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 5
cit00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03082 ATP-dependent chromatin remodeling 2
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03082 ATP-dependent chromatin remodeling 4
bdi03030 DNA replication 4
bdi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 2
nta03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
nta04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 818463 824621 100796183 100499998 101268740 101256783 4331710 4348638 103643659 100216638 103868480 103841363 100265256 100249276 18096145 7495754 11442215 11431267 123113275 123122788 123452177 123429101 107941646 107955482 106402324 106407449 5719077 110431421 102591023 102581303 102620198 102610066 100824636 100826987 107771657 107781461
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