ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bdi-r.1	100840870	probable histone H2A variant 3
bdi-r.1	100826987	probable histone H2A variant 2
bdi-r.1	100824636	probable histone H2A variant 3
tae-r.2	123113275	probable histone H2A variant 3
tae-r.2	123104983	probable histone H2A variant 3
tae-r.2	123118736	probable histone H2A variant 2
hvu-r.1	123429101	probable histone H2A variant 2
hvu-r.1	123452177	probable histone H2A variant 3
osa-u.5	4331710	probable histone H2A variant 1
osa-u.5	4334071	probable histone H2A variant 3
osa-u.5	4348638	probable histone H2A variant 2
zma-u.5	100273753	Histone H2A
zma-u.5	100383617	Histone H2A
sbi-r.1	8059849	probable histone H2A variant 1
sbi-r.1	8070617	probable histone H2A variant 1
ath-u.5	HTA8	histone H2A 8
ath-u.5	HTA11	histone H2A 11
ath-u.5	HTA9	histone H2A protein 9
gma-u.5	100500629	uncharacterized LOC100500629
gma-u.5	100807862	histone H2A variant 1
gma-u.5	100796183	histone H2A variant 1
sly-u.5	101256783	probable histone H2A variant 1
sly-u.5	101267931	probable histone H2A variant 1
sly-u.5	101268740	probable histone H2A variant 3
bra-r.6	103871193	probable histone H2A variant 3
bra-r.6	103868480	probable histone H2A variant 3
bra-r.6	103857819	probable histone H2A variant 2
vvi-u.5	100249276	probable histone H2A variant 3
vvi-u.5	100265256	probable histone H2A variant 3
vvi-u.5	100257988	histone H2A variant 1
ppo-u.5	7471570	probable histone H2A variant 3
ppo-u.5	7495754	probable histone H2A variant 3
ppo-u.5	7459008	probable histone H2A variant 3
mtr-u.5	11429815	probable histone H2A variant 3
mtr-u.5	11421897	histone H2A variant 1
mtr-u.5	11431267	histone H2A variant 1
ghi-r.1	107891684	probable histone H2A variant 3
ghi-r.1	107940216	histone H2A variant 1
ghi-r.1	107938788	probable histone H2A variant 3
bna-r.1	106405854	probable histone H2A variant 3
bna-r.1	125598494	probable histone H2A variant 3
bna-r.1	125598502	probable histone H2A variant 3
sot-r.1	102581303	probable histone H2A variant 3
sot-r.1	102604745	probable histone H2A variant 1
sot-r.1	102591023	probable histone H2A variant 1
cit-r.1	102610066	probable histone H2A variant 3
cit-r.1	102612477	histone H2A variant 1
cit-r.1	102620198	probable histone H2A variant 3
nta-r.1	107793131	putative histone H2A variant 1
nta-r.1	107781461	putative histone H2A variant 3
nta-r.1	107771868	putative histone H2A variant 1
cre-r.1	CHLRE_13g567700v5	uncharacterized protein

Top 50 coexpressed genes to 100840870 (bdi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100840870 (bdi-r.1 coexpression data)

CoexMap"100840870"

[Cytoscape]

Annotation

functional annotation

KEGG

bdi03082 [list] [network] ATP-dependent chromatin remodeling (59 genes)

GO BP

GO CC

GO:0000786 [list] [network] nucleosome

(64 genes)

IEA

GO MF

GO:0030527 [list] [network] structural constituent of chromatin	(55 genes)	IEA
GO:0046982 [list] [network] protein heterodimerization activity	(102 genes)	IEA
GO:0003677 [list] [network] DNA binding	(1744 genes)	IEA

Protein

XP_003559820.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 5, cyto 3, nucl_plas 3

(predict for XP_003559820.1)

Subcellular
localization
TargetP

other 6

(predict for XP_003559820.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bdi-r.1 for 100840870	bdi-r.1 for 100826987	bdi-r.1 for 100824636	tae-r.2 for 123113275	tae-r.2 for 123104983	tae-r.2 for 123118736	hvu-r.1 for 123429101	hvu-r.1 for 123452177	osa-u.5 for 4331710	osa-u.5 for 4334071	osa-u.5 for 4348638	zma-u.5 for 100273753	zma-u.5 for 100383617	sbi-r.1 for 8059849	sbi-r.1 for 8070617	ath-u.5 for HTA8	ath-u.5 for HTA11	ath-u.5 for HTA9	gma-u.5 for 100500629	gma-u.5 for 100807862	gma-u.5 for 100796183	sly-u.5 for 101256783	sly-u.5 for 101267931	sly-u.5 for 101268740	bra-r.6 for 103871193	bra-r.6 for 103868480	bra-r.6 for 103857819	vvi-u.5 for 100249276	vvi-u.5 for 100265256	vvi-u.5 for 100257988	ppo-u.5 for 7471570	ppo-u.5 for 7495754	ppo-u.5 for 7459008	mtr-u.5 for 11429815	mtr-u.5 for 11421897	mtr-u.5 for 11431267	ghi-r.1 for 107891684	ghi-r.1 for 107940216	ghi-r.1 for 107938788	bna-r.1 for 106405854	bna-r.1 for 125598494	bna-r.1 for 125598502	sot-r.1 for 102581303	sot-r.1 for 102604745	sot-r.1 for 102591023	cit-r.1 for 102610066	cit-r.1 for 102612477	cit-r.1 for 102620198	nta-r.1 for 107793131	nta-r.1 for 107781461	nta-r.1 for 107771868	cre-r.1 for CHLRE_13g567700v5

Ortholog

Ortholog ID: 793

Species

bdi

tae

hvu

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

HTA8

HTA11

HTA9

Function^*

probable histone H2A variant 3

probable histone H2A variant 2

probable histone H2A variant 3

probable histone H2A variant 2

probable histone H2A variant 3

probable histone H2A variant 1

probable histone H2A variant 3

probable histone H2A variant 2

Histone H2A

probable histone H2A

uncharacterized LOC100216638

probable histone H2A variant 1

probable histone H2A variant 3

histone H2A 8

histone H2A 11

histone H2A protein 9

histone H2A variant 1

uncharacterized LOC100499998

probable histone H2A variant 1

probable histone H2A variant 3

histone H2A variant 1

probable histone H2A variant 3

histone H2A variant 1

probable histone H2A variant 3

histone H2A variant 1

probable histone H2A variant 3

histone H2A variant 1

probable histone H2A variant 3

histone H2A variant 1

probable histone H2A variant 3

histone H2A variant 1

probable histone H2A variant 3

probable histone H2A variant 1

probable histone H2A variant 3

histone H2A variant 1

probable histone H2A variant 3

putative histone H2A variant 3

putative histone H2A variant 1

uncharacterized protein

Coexmap

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Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04144	Endocytosis	3
bdi04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03082	ATP-dependent chromatin remodeling	4
bdi03030	DNA replication	4
bdi03430	Mismatch repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03082	ATP-dependent chromatin remodeling	2
bdi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04141	Protein processing in endoplasmic reticulum	4
tae03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03082	ATP-dependent chromatin remodeling	6
tae03030	DNA replication	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03030	DNA replication	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00190	Oxidative phosphorylation	2
hvu04145	Phagosome	2
hvu03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00190	Oxidative phosphorylation	3
osa03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03082	ATP-dependent chromatin remodeling	3
osa00230	Purine metabolism	2
osa00240	Pyrimidine metabolism	2
osa00480	Glutathione metabolism	2
osa01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03030	DNA replication	5
zma03420	Nucleotide excision repair	4
zma03430	Mismatch repair	4
zma03440	Homologous recombination	3
zma03460	Fanconi anemia pathway	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03082	ATP-dependent chromatin remodeling	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03050	Proteasome	6
zma04814	Motor proteins	3
zma03082	ATP-dependent chromatin remodeling	3
zma03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03082	ATP-dependent chromatin remodeling	6
sbi04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04016	MAPK signaling pathway - plant	3
sbi04070	Phosphatidylinositol signaling system	3
sbi04075	Plant hormone signal transduction	3
sbi04626	Plant-pathogen interaction	3
sbi04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03082	ATP-dependent chromatin remodeling	5
ath03030	DNA replication	4
ath03410	Base excision repair	2
ath03420	Nucleotide excision repair	2
ath03430	Mismatch repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03082	ATP-dependent chromatin remodeling	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03030	DNA replication	4
gma03082	ATP-dependent chromatin remodeling	2
gma03410	Base excision repair	2
gma03420	Nucleotide excision repair	2
gma03430	Mismatch repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03082	ATP-dependent chromatin remodeling	5
gma03030	DNA replication	2
gma03420	Nucleotide excision repair	2
gma03430	Mismatch repair	2
gma03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	4
gma04016	MAPK signaling pathway - plant	3
gma04070	Phosphatidylinositol signaling system	3
gma04075	Plant hormone signal transduction	3
gma04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	5
sly03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	3
sly04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	3
bra03013	Nucleocytoplasmic transport	2
bra03015	mRNA surveillance pathway	2
bra03040	Spliceosome	2
bra03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03030	DNA replication	2
bra03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04814	Motor proteins	3
bra04144	Endocytosis	2
bra04820	Cytoskeleton in muscle cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04130	SNARE interactions in vesicular transport	4
vvi04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03050	Proteasome	11

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04814	Motor proteins	4
vvi04145	Phagosome	2
vvi04517	IgSF CAM signaling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	14
ppo03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03082	ATP-dependent chromatin remodeling	3
ppo04814	Motor proteins	3
ppo04145	Phagosome	2
ppo04517	IgSF CAM signaling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03082	ATP-dependent chromatin remodeling	5
ppo00190	Oxidative phosphorylation	2
ppo03040	Spliceosome	2
ppo03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	16
mtr03082	ATP-dependent chromatin remodeling	2
mtr03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03082	ATP-dependent chromatin remodeling	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	4
mtr00190	Oxidative phosphorylation	3
mtr03020	RNA polymerase	2
mtr03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03082	ATP-dependent chromatin remodeling	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03082	ATP-dependent chromatin remodeling	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03082	ATP-dependent chromatin remodeling	10
ghi03050	Proteasome	3
ghi03060	Protein export	2
ghi04141	Protein processing in endoplasmic reticulum	2
ghi04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03082	ATP-dependent chromatin remodeling	11
bna00010	Glycolysis / Gluconeogenesis	2
bna00040	Pentose and glucuronate interconversions	2
bna00053	Ascorbate and aldarate metabolism	2
bna00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03082	ATP-dependent chromatin remodeling	11
bna03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03082	ATP-dependent chromatin remodeling	7
bna03050	Proteasome	2
bna00100	Steroid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03008	Ribosome biogenesis in eukaryotes	2
sot03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03082	ATP-dependent chromatin remodeling	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	5
cit00190	Oxidative phosphorylation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03082	ATP-dependent chromatin remodeling	2
nta04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00190	Oxidative phosphorylation	2
nta03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03082	ATP-dependent chromatin remodeling	6
nta03040	Spliceosome	3

Expression

Expression pattern

Entrez Gene ID^*

100840870

100826987

100824636

123113275

123122788

123042671

123429101

123452177

4331710

4334071

4348638

100273753

103643659

100216638

8059849

110431421

818463

824621

841707

100796183

100782374

100499998

101256783

101267931

101268740

103868480

103841363

103840638

100249276

100265256

100257988

7495754

18096145

18107499

11429815

11431267

11442215

107941646

107955482

121229342

125598494

106402324

106407449

102581303

102604745

102591023

102610066

102612477

102620198

107781461

107771657

107760987

5719077

The preparation time of this page was 0.2 [sec].


Species	bdi	tae	hvu	osa	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	3	3	2	3	2	2	3	3	3	3	3	3	3	3	3	3	3	3	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100840870 (bdi-r.1 coexpression data)

Top 50 enrichment test to 100840870 (bdi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**