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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_06g252650v5   uncharacterized protein 
 ath-u.5   AT2G43090   Aconitase/3-isopropylmalate dehydratase protein 
 ath-u.5   IPMI1   isopropylmalate isomerase 1 
 gma-u.5   100809737   3-isopropylmalate dehydratase small subunit 1 
 gma-u.5   100782688   3-isopropylmalate dehydratase small subunit 1 
 sly-u.5   101250813   3-isopropylmalate dehydratase small subunit 1 
 osa-u.5   4330192   3-isopropylmalate dehydratase small subunit 1 
 zma-u.5   100286245   3-isopropylmalate dehydratase small subunit 2 
 bra-r.6   103866694   3-isopropylmalate dehydratase small subunit 3 
 vvi-u.5   100241307   3-isopropylmalate dehydratase small subunit-like 
 ppo-u.5   7465501   3-isopropylmalate dehydratase small subunit 1 
 mtr-u.5   25491331   3-isopropylmalate dehydratase small subunit 1 
 tae-r.2   123127898   3-isopropylmalate dehydratase small subunit 1 
 tae-r.2   123137736   3-isopropylmalate dehydratase small subunit 1 
 tae-r.2   123144990   3-isopropylmalate dehydratase small subunit 1 
 hvu-r.1   123402876   3-isopropylmalate dehydratase small subunit 1-like 
 ghi-r.1   121215948   3-isopropylmalate dehydratase small subunit 1 
 ghi-r.1   121214804   3-isopropylmalate dehydratase small subunit 1 
 ghi-r.1   107949221   3-isopropylmalate dehydratase small subunit 1 
 bna-r.1   125606862   3-isopropylmalate dehydratase small subunit 1-like 
 bna-r.1   106434492   3-isopropylmalate dehydratase small subunit 1 
 bna-r.1   106421017   3-isopropylmalate dehydratase small subunit 1-like 
 sbi-r.1   8073966   3-isopropylmalate dehydratase small subunit 3 
 sot-r.1   102596097   3-isopropylmalate dehydratase small subunit 3-like 
 cit-r.1   102622858   3-isopropylmalate dehydratase small subunit 1-like 
 bdi-r.1   100844678   3-isopropylmalate dehydratase small subunit 3 
 nta-r.1   107827507   3-isopropylmalate dehydratase small subunit 1 
 nta-r.1   107766175   3-isopropylmalate dehydratase small subunit 1-like 
 nta-r.1   107827504   3-isopropylmalate dehydratase small subunit 1-like 

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Top 50 coexpressed genes to CHLRE_06g252650v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_06g252650v5 (cre-r.1 coexpression data)

CoexMap"5722169"


creCHLRE_06g252650v5 | Entrez gene ID : 5722169      
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 2 2 1 1 1 1 1 1 1 3 1 3 3 1 1 1 1 3
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cre00290 [list] [network] Valine, leucine and isoleucine biosynthesis (11 genes)
cre00660 [list] [network] C5-Branched dibasic acid metabolism (5 genes)
cre01210 [list] [network] 2-Oxocarboxylic acid metabolism (46 genes)
cre01230 [list] [network] Biosynthesis of amino acids (116 genes)
GO BP
GO CC
GO MF
GO:0016836 [list] [network] hydro-lyase activity  (40 genes)  IEA  
Protein XP_001696402.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  mito 4,  nucl 1  (predict for XP_001696402.1)
Subcellular
localization
TargetP
mito 6  (predict for XP_001696402.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_06g252650v5
ath-u.5
for
AT2G43090
ath-u.5
for
IPMI1
gma-u.5
for
100809737
gma-u.5
for
100782688
sly-u.5
for
101250813
osa-u.5
for
4330192
zma-u.5
for
100286245
bra-r.6
for
103866694
vvi-u.5
for
100241307
ppo-u.5
for
7465501
mtr-u.5
for
25491331
tae-r.2
for
123127898
tae-r.2
for
123137736
tae-r.2
for
123144990
hvu-r.1
for
123402876
ghi-r.1
for
121215948
ghi-r.1
for
121214804
ghi-r.1
for
107949221
bna-r.1
for
125606862
bna-r.1
for
106434492
bna-r.1
for
106421017
sbi-r.1
for
8073966
sot-r.1
for
102596097
cit-r.1
for
102622858
bdi-r.1
for
100844678
nta-r.1
for
107827507
nta-r.1
for
107766175
nta-r.1
for
107827504


Ortholog ID: 6847
Species cre ath ath gma gma sly osa zma bra vvi ppo mtr tae tae tae hvu ghi ghi ghi bna bna bna sbi sot cit bdi nta nta nta
Symbol CHLRE_06g252650v5 AT2G43090 IPMI1 LOC100809737 LOC100782688 LOC101250813 LOC4330192 LOC100286245 LOC103866694 LOC100241307 LOC7465501 LOC25491331 LOC123127898 LOC123137736 LOC123144990 LOC123402876 LOC121214804 LOC107949221 LOC107898889 LOC106434492 LOC106421017 LOC106384003 LOC8073966 LOC102596097 LOC102622858 LOC100844678 LOC107827507 LOC107766175 LOC107827504
Function* uncharacterized protein Aconitase/3-isopropylmalate dehydratase protein isopropylmalate isomerase 1 3-isopropylmalate dehydratase small subunit 1 3-isopropylmalate dehydratase small subunit 1 3-isopropylmalate dehydratase small subunit 1 3-isopropylmalate dehydratase small subunit 1 3-isopropylmalate dehydratase small subunit 2 3-isopropylmalate dehydratase small subunit 3 3-isopropylmalate dehydratase small subunit-like 3-isopropylmalate dehydratase small subunit 1 3-isopropylmalate dehydratase small subunit 1 3-isopropylmalate dehydratase small subunit 1 3-isopropylmalate dehydratase small subunit 1 3-isopropylmalate dehydratase small subunit 1 3-isopropylmalate dehydratase small subunit 1-like 3-isopropylmalate dehydratase small subunit 1 3-isopropylmalate dehydratase small subunit 1 3-isopropylmalate dehydratase small subunit 1 3-isopropylmalate dehydratase small subunit 1 3-isopropylmalate dehydratase small subunit 1-like 3-isopropylmalate dehydratase small subunit 1 3-isopropylmalate dehydratase small subunit 3 3-isopropylmalate dehydratase small subunit 3-like 3-isopropylmalate dehydratase small subunit 1-like 3-isopropylmalate dehydratase small subunit 3 3-isopropylmalate dehydratase small subunit 1 3-isopropylmalate dehydratase small subunit 1-like 3-isopropylmalate dehydratase small subunit 1-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00970 Aminoacyl-tRNA biosynthesis 4
cre01230 Biosynthesis of amino acids 4
cre00561 Glycerolipid metabolism 2
cre00290 Valine, leucine and isoleucine biosynthesis 2
cre01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01230 Biosynthesis of amino acids 12
ath01210 2-Oxocarboxylic acid metabolism 4
ath00300 Lysine biosynthesis 4
ath00220 Arginine biosynthesis 3
ath00340 Histidine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00966 Glucosinolate biosynthesis 9
ath01210 2-Oxocarboxylic acid metabolism 9
ath00290 Valine, leucine and isoleucine biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00290 Valine, leucine and isoleucine biosynthesis 2
gma00660 C5-Branched dibasic acid metabolism 2
gma01210 2-Oxocarboxylic acid metabolism 2
gma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 8
gma03050 Proteasome 4
gma00290 Valine, leucine and isoleucine biosynthesis 2
gma00660 C5-Branched dibasic acid metabolism 2
gma01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01230 Biosynthesis of amino acids 7
sly00290 Valine, leucine and isoleucine biosynthesis 2
sly00660 C5-Branched dibasic acid metabolism 2
sly01210 2-Oxocarboxylic acid metabolism 2
sly00300 Lysine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 6
osa01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01210 2-Oxocarboxylic acid metabolism 5
zma01230 Biosynthesis of amino acids 5
zma00290 Valine, leucine and isoleucine biosynthesis 4
zma00660 C5-Branched dibasic acid metabolism 4
zma00966 Glucosinolate biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 5
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 5
ppo01210 2-Oxocarboxylic acid metabolism 3
ppo01230 Biosynthesis of amino acids 3
ppo00290 Valine, leucine and isoleucine biosynthesis 2
ppo00660 C5-Branched dibasic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01230 Biosynthesis of amino acids 5
mtr01200 Carbon metabolism 3
mtr01210 2-Oxocarboxylic acid metabolism 2
mtr00260 Glycine, serine and threonine metabolism 2
mtr00750 Vitamin B6 metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01230 Biosynthesis of amino acids 10
tae00290 Valine, leucine and isoleucine biosynthesis 9
tae01210 2-Oxocarboxylic acid metabolism 9
tae00660 C5-Branched dibasic acid metabolism 6
tae00620 Pyruvate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01230 Biosynthesis of amino acids 9
tae00290 Valine, leucine and isoleucine biosynthesis 8
tae01210 2-Oxocarboxylic acid metabolism 8
tae00660 C5-Branched dibasic acid metabolism 5
tae00620 Pyruvate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01230 Biosynthesis of amino acids 9
tae00290 Valine, leucine and isoleucine biosynthesis 8
tae01210 2-Oxocarboxylic acid metabolism 8
tae00660 C5-Branched dibasic acid metabolism 5
tae00620 Pyruvate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00190 Oxidative phosphorylation 6
hvu01230 Biosynthesis of amino acids 4
hvu01210 2-Oxocarboxylic acid metabolism 3
hvu00290 Valine, leucine and isoleucine biosynthesis 2
hvu00660 C5-Branched dibasic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00290 Valine, leucine and isoleucine biosynthesis 4
ghi00660 C5-Branched dibasic acid metabolism 4
ghi01210 2-Oxocarboxylic acid metabolism 4
ghi01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00290 Valine, leucine and isoleucine biosynthesis 4
ghi00660 C5-Branched dibasic acid metabolism 4
ghi01210 2-Oxocarboxylic acid metabolism 4
ghi01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00290 Valine, leucine and isoleucine biosynthesis 4
ghi00660 C5-Branched dibasic acid metabolism 4
ghi01210 2-Oxocarboxylic acid metabolism 4
ghi01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01240 Biosynthesis of cofactors 4
bna00290 Valine, leucine and isoleucine biosynthesis 4
bna00660 C5-Branched dibasic acid metabolism 4
bna01210 2-Oxocarboxylic acid metabolism 4
bna01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01240 Biosynthesis of cofactors 4
bna00290 Valine, leucine and isoleucine biosynthesis 4
bna00660 C5-Branched dibasic acid metabolism 4
bna01210 2-Oxocarboxylic acid metabolism 4
bna01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00290 Valine, leucine and isoleucine biosynthesis 4
bna00660 C5-Branched dibasic acid metabolism 4
bna01210 2-Oxocarboxylic acid metabolism 4
bna01230 Biosynthesis of amino acids 4
bna01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 4
sbi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01230 Biosynthesis of amino acids 5
sot01210 2-Oxocarboxylic acid metabolism 4
sot01200 Carbon metabolism 3
sot00190 Oxidative phosphorylation 3
sot00220 Arginine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 4
cit01230 Biosynthesis of amino acids 3
cit01210 2-Oxocarboxylic acid metabolism 2
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01230 Biosynthesis of amino acids 5
bdi01210 2-Oxocarboxylic acid metabolism 4
bdi00190 Oxidative phosphorylation 3
bdi00790 Folate biosynthesis 2
bdi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 6
nta00290 Valine, leucine and isoleucine biosynthesis 3
nta00660 C5-Branched dibasic acid metabolism 3
nta01210 2-Oxocarboxylic acid metabolism 3
nta01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 7
nta04148 Efferocytosis 4
nta00290 Valine, leucine and isoleucine biosynthesis 3
nta00660 C5-Branched dibasic acid metabolism 3
nta01210 2-Oxocarboxylic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 8
nta00290 Valine, leucine and isoleucine biosynthesis 3
nta00660 C5-Branched dibasic acid metabolism 3
nta01210 2-Oxocarboxylic acid metabolism 3
nta01230 Biosynthesis of amino acids 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5722169 818911 825068 100809737 100782688 101250813 4330192 100286245 103866694 100241307 7465501 25491331 123127898 123137736 123144990 123402876 121214804 107949221 107898889 106434492 106421017 106384003 8073966 102596097 102622858 100844678 107827507 107766175 107827504
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