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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_17g727350v5   uncharacterized protein 
 ath-u.5   AT4G39880   Ribosomal protein L23/L15e family protein 
 gma-u.5   100800404   uncharacterized LOC100800404 
 gma-u.5   100799927   50S ribosomal protein L23 
 sly-u.5   101256642   uncharacterized LOC101256642 
 osa-u.5   4343020   uncharacterized LOC4343020 
 zma-u.5   100282534   uncharacterized LOC100282534 
 vvi-u.5   100245960   uncharacterized LOC100245960 
 ppo-u.5   7476080   uncharacterized LOC7476080 
 mtr-u.5   11415029   uncharacterized LOC11415029 

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Top 50 coexpressed genes to CHLRE_17g727350v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_17g727350v5 (cre-r.1 coexpression data)

CoexMap"5722806"


creCHLRE_17g727350v5 | Entrez gene ID : 5722806      
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 1 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0032543 [list] [network] mitochondrial translation  (16 genes)  IEA  
GO CC
GO:0005762 [list] [network] mitochondrial large ribosomal subunit  (16 genes)  IEA  
GO:0005840 [list] [network] ribosome  (168 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (164 genes)  IEA  
Protein XP_001697169.2 [sequence] [blastp]
Subcellular
localization
wolf
mito 4,  nucl 2,  chlo_mito 2,  nucl_plas 2  (predict for XP_001697169.2)
Subcellular
localization
TargetP
other 8  (predict for XP_001697169.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_17g727350v5

.
ath-u.5
for
AT4G39880

.
gma-u.5
for
100800404

.
gma-u.5
for
100799927

.
sly-u.5
for
101256642

.
osa-u.5
for
4343020

.
zma-u.5
for
100282534

.
vvi-u.5
for
100245960

.
ppo-u.5
for
7476080

.
mtr-u.5
for
11415029

.


Ortholog ID: 6638
Species ath gma sly osa zma bra bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT4G39880 LOC100800404 LOC101256642 LOC4343020 LOC100282534 LOC103862612 LOC103853478 LOC100245960 LOC7476080 LOC11415029 LOC123165779 LOC123152532 LOC123407722 LOC107898526 LOC121223084 LOC106353435 LOC106441272 CHLRE_17g727350v5 LOC8079529 LOC102577655 LOC102620099 LOC100826794 LOC107824930 LOC107798942
Function* Ribosomal protein L23/L15e family protein uncharacterized LOC100800404 uncharacterized LOC101256642 uncharacterized LOC4343020 uncharacterized LOC100282534 50S ribosomal protein L23 50S ribosomal protein L23 uncharacterized LOC100245960 uncharacterized LOC7476080 uncharacterized LOC11415029 uncharacterized LOC123165779 uncharacterized LOC123152532 uncharacterized LOC123407722 uncharacterized LOC107898526 uncharacterized LOC121223084 50S ribosomal protein L23-like 50S ribosomal protein L23 uncharacterized protein uncharacterized LOC8079529 ribosomal protein L23 family protein uncharacterized LOC102620099 uncharacterized LOC100826794 uncharacterized LOC107824930 uncharacterized LOC107798942
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 16
gma04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 3
sly03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 5
osa00240 Pyrimidine metabolism 2
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 2
zma03040 Spliceosome 2
zma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 4
bra04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 9
mtr03420 Nucleotide excision repair 3
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 16
tae04120 Ubiquitin mediated proteolysis 4
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 14
tae03040 Spliceosome 2
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 8
bna03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 7
bna03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 10
sot00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 11
bdi03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 830147 100800404 101256642 4343020 100282534 103862612 103853478 100245960 7476080 11415029 123165779 123152532 123407722 107898526 121223084 106353435 106441272 5722806 8079529 102577655 102620099 100826794 107824930 107798942
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