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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_07g319701v5   uncharacterized protein 
 cre-r.1   CHLRE_08g358532v5   uncharacterized protein 
 cre-r.1   CHLRE_10g435450v5   uncharacterized protein 
 ath-u.5   GATA20   GATA transcription factor 20 
 ath-u.5   GATA16   GATA transcription factor 16 
 gma-u.5   100806819   GATA transcription factor 17 
 gma-u.5   100799175   GATA transcription factor 16 
 sly-u.5   101265416   GATA transcription factor 16-like 
 sly-u.5   101248643   GATA transcription factor 18-like 
 sly-u.5   101268354   putative GATA transcription factor 22 
 osa-u.5   4334668   GATA transcription factor 16 
 zma-u.5   100285453   GATA transcription factor 22 
 zma-u.5   100284189   uncharacterized LOC100284189 
 zma-u.5   103651395   GATA transcription factor 15 
 bra-r.6   103862478   GATA transcription factor 19-like 
 vvi-u.5   100247474   putative GATA transcription factor 22 
 ppo-u.5   18107608   putative GATA transcription factor 22 
 ppo-u.5   18101866   GATA transcription factor 15 
 mtr-u.5   11405635   GATA transcription factor 19 
 mtr-u.5   11417944   GATA transcription factor 18 
 mtr-u.5   11421360   GATA transcription factor 16 
 tae-r.2   123114111   GATA transcription factor 15 
 tae-r.2   123123598   GATA transcription factor 15 
 tae-r.2   123113531   GATA transcription factor 17 
 hvu-r.1   123406248   GATA transcription factor 17-like 
 hvu-r.1   123425998   GATA zinc finger domain-containing protein 6-like 
 ghi-r.1   107962878   putative GATA transcription factor 22 
 bna-r.1   106446696   GATA transcription factor 17 
 bna-r.1   106452076   GATA transcription factor 17 
 sbi-r.1   110433298   GATA transcription factor 23-like 
 sbi-r.1   8074146   GATA transcription factor 15 
 sot-r.1   102585472   GATA transcription factor 15-like 
 sot-r.1   102580153   GATA transcription factor 15-like 
 sot-r.1   102587834   putative GATA transcription factor 22 
 cit-r.1   102623069   GATA transcription factor 16-like 
 cit-r.1   102626792   GATA transcription factor 21 
 bdi-r.1   100827983   GATA transcription factor 23 
 bdi-r.1   100837762   GATA transcription factor 16 
 nta-r.1   107764238   putative GATA transcription factor 22 
 nta-r.1   107778594   GATA transcription factor 17 

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Top 50 coexpressed genes to CHLRE_07g319701v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_07g319701v5 (cre-r.1 coexpression data)

CoexMap"5726572"


creCHLRE_07g319701v5 | Entrez gene ID : 5726572    
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 3 2 2 3 1 3 1 1 2 3 3 2 1 2 2 3 2 2 2
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (405 genes)  IEA  
GO CC
GO MF
GO:0043565 [list] [network] sequence-specific DNA binding  (166 genes)  IEA  
GO:0008270 [list] [network] zinc ion binding  (213 genes)  IEA  
Protein XP_001701024.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  mito 3,  E.R. 2  (predict for XP_001701024.2)
Subcellular
localization
TargetP
mito 5  (predict for XP_001701024.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_07g319701v5
cre-r.1
for
CHLRE_08g358532v5
cre-r.1
for
CHLRE_10g435450v5
ath-u.5
for
GATA20
ath-u.5
for
GATA16
gma-u.5
for
100806819
gma-u.5
for
100799175
sly-u.5
for
101265416
sly-u.5
for
101248643
sly-u.5
for
101268354
osa-u.5
for
4334668
zma-u.5
for
100285453
zma-u.5
for
100284189
zma-u.5
for
103651395
bra-r.6
for
103862478
vvi-u.5
for
100247474
ppo-u.5
for
18107608
ppo-u.5
for
18101866
mtr-u.5
for
11405635
mtr-u.5
for
11417944
mtr-u.5
for
11421360
tae-r.2
for
123114111
tae-r.2
for
123123598
tae-r.2
for
123113531
hvu-r.1
for
123406248
hvu-r.1
for
123425998
ghi-r.1
for
107962878
bna-r.1
for
106446696
bna-r.1
for
106452076
sbi-r.1
for
110433298
sbi-r.1
for
8074146
sot-r.1
for
102585472
sot-r.1
for
102580153
sot-r.1
for
102587834
cit-r.1
for
102623069
cit-r.1
for
102626792
bdi-r.1
for
100827983
bdi-r.1
for
100837762
nta-r.1
for
107764238
nta-r.1
for
107778594


Ortholog ID: 206
Species cre cre cre ath ath ath gma gma gma sly sly osa osa osa zma zma bra bra vvi vvi ppo mtr mtr tae tae hvu ghi ghi ghi bna bna sbi sbi sot sot cit cit bdi bdi bdi nta nta
Symbol CHLRE_07g319701v5 CHLRE_08g358532v5 CHLRE_10g435450v5 GATA19 AT4G16141 GATA15 LOC100780326 LOC100527933 LOC100790571 LOC101265416 LOC101266764 LOC4334668 LOC4327810 LOC4326489 LOC100285453 LOC100284189 LOC103860826 LOC103869729 LOC100247474 LOC100256170 LOC7496479 LOC11405635 LOC11417944 LOC123113531 LOC123180571 LOC123445761 LOC107933196 LOC107893291 LOC107909404 LOC106351111 LOC106444055 LOC110433298 LOC8080199 LOC102604842 LOC102581535 LOC102623069 LOC102629993 LOC100827983 LOC100837762 LOC100845583 LOC107764238 LOC107778594
Function* uncharacterized protein uncharacterized protein uncharacterized protein GATA transcription factor 19 GATA type zinc finger transcription factor family protein GATA transcription factor 15 putative GATA transcription factor 22 uncharacterized LOC100527933 GATA transcription factor 18 GATA transcription factor 16-like GATA transcription factor 16 GATA transcription factor 16 GATA transcription factor 16 GATA transcription factor 23 GATA transcription factor 22 uncharacterized LOC100284189 GATA transcription factor 17 GATA transcription factor 17 putative GATA transcription factor 22 GATA transcription factor 16 GATA transcription factor 16 GATA transcription factor 19 GATA transcription factor 18 GATA transcription factor 17 GATA transcription factor 17 GATA transcription factor 16-like GATA transcription factor 15 GATA transcription factor 15 GATA transcription factor 18 GATA transcription factor 15-like GATA transcription factor 17 GATA transcription factor 23-like GATA transcription factor 16 GATA transcription factor 19 GATA transcription factor 16-like GATA transcription factor 16-like GATA transcription factor 16-like GATA transcription factor 23 GATA transcription factor 16 GATA transcription factor 17 putative GATA transcription factor 22 GATA transcription factor 17
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 3
ath03420 Nucleotide excision repair 3
ath03430 Mismatch repair 3
ath03440 Homologous recombination 3
ath03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00196 Photosynthesis - antenna proteins 2
vvi00860 Porphyrin metabolism 2
vvi04120 Ubiquitin mediated proteolysis 2
vvi04712 Circadian rhythm - plant 2
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 12
ppo00510 N-Glycan biosynthesis 2
ppo00513 Various types of N-glycan biosynthesis 2
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 10
hvu04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00760 Nicotinate and nicotinamide metabolism 4
bna01240 Biosynthesis of cofactors 4
bna00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01240 Biosynthesis of cofactors 2
sbi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00531 Glycosaminoglycan degradation 3
bdi00460 Cyanoamino acid metabolism 2
bdi00500 Starch and sucrose metabolism 2
bdi00999 Biosynthesis of various plant secondary metabolites 2
bdi00511 Other glycan degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 4
bdi03082 ATP-dependent chromatin remodeling 2
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 4
nta00760 Nicotinate and nicotinamide metabolism 2
nta04146 Peroxisome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5726572 5729269 5716063 829814 827301 819859 100780326 100527933 100790571 101265416 101266764 4334668 4327810 4326489 100285453 100284189 103860826 103869729 100247474 100256170 7496479 11405635 11417944 123113531 123180571 123445761 107933196 107893291 107909404 106351111 106444055 110433298 8080199 102604842 102581535 102623069 102629993 100827983 100837762 100845583 107764238 107778594
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