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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   GATA16   GATA transcription factor 16 
 ath-r.7   GATA16   GATA transcription factor 16 
 ath-e.2   GATA16   GATA transcription factor 16 
 ath-u.5   GATA20   GATA transcription factor 20 
 ath-u.5   GATA19   GATA transcription factor 19 
 bra-r.6   103869729   GATA transcription factor 17 
 bna-r.1   106446696   GATA transcription factor 17 
 bna-r.1   106452076   GATA transcription factor 17 
 ghi-r.1   107962878   putative GATA transcription factor 22 
 cit-r.1   102623069   GATA transcription factor 16-like 
 cit-r.1   102629993   GATA transcription factor 16-like 
 gma-u.5   100810698   GATA transcription factor 21 
 gma-u.5   100806819   GATA transcription factor 17 
 vvi-u.5   100253375   GATA transcription factor 16 
 vvi-u.5   100256170   GATA transcription factor 16 
 ppo-u.5   7470700   GATA transcription factor 21 
 ppo-u.5   18098618   GATA transcription factor 16 
 mtr-u.5   11422443   GATA transcription factor 21 
 mtr-u.5   11417944   GATA transcription factor 18 
 sly-u.5   101268354   putative GATA transcription factor 22 
 sot-r.1   102587834   putative GATA transcription factor 22 
 sot-r.1   102585472   GATA transcription factor 15-like 
 sot-r.1   102584883   GATA transcription factor 23-like 
 nta-r.1   107762304   GATA transcription factor 15 
 nta-r.1   107764238   putative GATA transcription factor 22 
 nta-r.1   107827815   GATA transcription factor 21 
 osa-u.5   4326489   GATA transcription factor 23 
 osa-u.5   4327810   GATA transcription factor 16 
 osa-u.5   4334668   GATA transcription factor 16 
 zma-u.5   100285453   GATA transcription factor 22 
 zma-u.5   100284189   uncharacterized LOC100284189 
 zma-u.5   100276694   uncharacterized LOC100276694 
 tae-r.2   123114111   GATA transcription factor 15 
 tae-r.2   123123598   GATA transcription factor 15 
 hvu-r.1   123406248   GATA transcription factor 17-like 
 hvu-r.1   123425998   GATA zinc finger domain-containing protein 6-like 
 sbi-r.1   110433298   GATA transcription factor 23-like 
 bdi-r.1   100837762   GATA transcription factor 16 
 cre-r.1   CHLRE_08g358532v5   uncharacterized protein 
 cre-r.1   CHLRE_10g435450v5   uncharacterized protein 
 cre-r.1   CHLRE_07g319701v5   uncharacterized protein 

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Top 50 coexpressed genes to GATA16 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to GATA16 (ath-u.5 coexpression data)

CoexMap"834990"


athGATA16 | Entrez gene ID : 834990      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 5 1 2 1 2 2 2 2 2 1 3 3 3 3 2 2 1 1 3
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1618 genes)  IEA ISS  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0000976 [list] [network] transcription cis-regulatory region binding  (716 genes)  IPI  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1620 genes)  ISS  
Protein NP_199741.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  chlo 1,  cyto 1  (predict for NP_199741.1)
Subcellular
localization
TargetP
other 9  (predict for NP_199741.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
GATA16
ath-r.7
for
GATA16
ath-e.2
for
GATA16
ath-u.5
for
GATA20
ath-u.5
for
GATA19
bra-r.6
for
103869729
bna-r.1
for
106446696
bna-r.1
for
106452076
ghi-r.1
for
107962878
cit-r.1
for
102623069
cit-r.1
for
102629993
gma-u.5
for
100810698
gma-u.5
for
100806819
vvi-u.5
for
100253375
vvi-u.5
for
100256170
ppo-u.5
for
7470700
ppo-u.5
for
18098618
mtr-u.5
for
11422443
mtr-u.5
for
11417944
sly-u.5
for
101268354
sot-r.1
for
102587834
sot-r.1
for
102585472
sot-r.1
for
102584883
nta-r.1
for
107762304
nta-r.1
for
107764238
nta-r.1
for
107827815
osa-u.5
for
4326489
osa-u.5
for
4327810
osa-u.5
for
4334668
zma-u.5
for
100285453
zma-u.5
for
100284189
zma-u.5
for
100276694
tae-r.2
for
123114111
tae-r.2
for
123123598
hvu-r.1
for
123406248
hvu-r.1
for
123425998
sbi-r.1
for
110433298
bdi-r.1
for
100837762
cre-r.1
for
CHLRE_08g358532v5
cre-r.1
for
CHLRE_10g435450v5
cre-r.1
for
CHLRE_07g319701v5


Ortholog ID: 206
Species ath ath ath bra bra bna bna ghi ghi ghi cit cit gma gma gma vvi vvi ppo mtr mtr sly sly sot sot nta nta osa osa osa zma zma tae tae hvu sbi sbi bdi bdi bdi cre cre cre
Symbol GATA19 AT4G16141 GATA15 LOC103869729 LOC103860826 LOC106444055 LOC106351111 LOC107933196 LOC107893291 LOC107909404 LOC102623069 LOC102629993 LOC100790571 LOC100527933 LOC100780326 LOC100256170 LOC100247474 LOC7496479 LOC11417944 LOC11405635 LOC101266764 LOC101265416 LOC102604842 LOC102581535 LOC107764238 LOC107778594 LOC4326489 LOC4327810 LOC4334668 LOC100285453 LOC100284189 LOC123180571 LOC123113531 LOC123445761 LOC110433298 LOC8080199 LOC100837762 LOC100845583 LOC100827983 CHLRE_08g358532v5 CHLRE_10g435450v5 CHLRE_07g319701v5
Function* GATA transcription factor 19 GATA type zinc finger transcription factor family protein GATA transcription factor 15 GATA transcription factor 17 GATA transcription factor 17 GATA transcription factor 17 GATA transcription factor 15-like GATA transcription factor 15 GATA transcription factor 15 GATA transcription factor 18 GATA transcription factor 16-like GATA transcription factor 16-like GATA transcription factor 18 uncharacterized LOC100527933 putative GATA transcription factor 22 GATA transcription factor 16 putative GATA transcription factor 22 GATA transcription factor 16 GATA transcription factor 18 GATA transcription factor 19 GATA transcription factor 16 GATA transcription factor 16-like GATA transcription factor 19 GATA transcription factor 16-like putative GATA transcription factor 22 GATA transcription factor 17 GATA transcription factor 23 GATA transcription factor 16 GATA transcription factor 16 GATA transcription factor 22 uncharacterized LOC100284189 GATA transcription factor 17 GATA transcription factor 17 GATA transcription factor 16-like GATA transcription factor 23-like GATA transcription factor 16 GATA transcription factor 16 GATA transcription factor 17 GATA transcription factor 23 uncharacterized protein uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 3
ath03420 Nucleotide excision repair 3
ath03430 Mismatch repair 3
ath03440 Homologous recombination 3
ath03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00760 Nicotinate and nicotinamide metabolism 4
bna01240 Biosynthesis of cofactors 4
bna00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00196 Photosynthesis - antenna proteins 2
vvi00860 Porphyrin metabolism 2
vvi04120 Ubiquitin mediated proteolysis 2
vvi04712 Circadian rhythm - plant 2
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 12
ppo00510 N-Glycan biosynthesis 2
ppo00513 Various types of N-glycan biosynthesis 2
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 4
nta00760 Nicotinate and nicotinamide metabolism 2
nta04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 10
hvu04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01240 Biosynthesis of cofactors 2
sbi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 4
bdi03082 ATP-dependent chromatin remodeling 2
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00531 Glycosaminoglycan degradation 3
bdi00460 Cyanoamino acid metabolism 2
bdi00500 Starch and sucrose metabolism 2
bdi00999 Biosynthesis of various plant secondary metabolites 2
bdi00511 Other glycan degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829814 827301 819859 103869729 103860826 106444055 106351111 107933196 107893291 107909404 102623069 102629993 100790571 100527933 100780326 100256170 100247474 7496479 11417944 11405635 101266764 101265416 102604842 102581535 107764238 107778594 4326489 4327810 4334668 100285453 100284189 123180571 123113531 123445761 110433298 8080199 100837762 100845583 100827983 5729269 5716063 5726572
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