Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_12g556911v5   uncharacterized protein 
 ath-u.5   MRE11   DNA repair and meiosis protein (Mre11) 
 gma-u.5   100801335   double-strand break repair protein MRE11 
 sly-u.5   101264663   double-strand break repair protein MRE11 
 osa-u.5   4337137   double-strand break repair protein MRE11-like 
 zma-u.5   100285133   double-strand break repair protein MRE11 
 vvi-u.5   100252167   Mre11 DNA repair/recombination protein 
 ppo-u.5   18095655   double-strand break repair protein MRE11 
 mtr-u.5   11436847   double-strand break repair protein MRE11 

close


Top 50 coexpressed genes to CHLRE_12g556911v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to CHLRE_12g556911v5 (cre-r.1 coexpression data)

CoexMap"5728367"


creCHLRE_12g556911v5 | Entrez gene ID : 5728367    
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0097552 [list] [network] mitochondrial double-strand break repair via homologous recombination  (1 genes)  IEA  
GO:0042138 [list] [network] meiotic DNA double-strand break formation  (3 genes)  IEA  
GO:0007095 [list] [network] mitotic G2 DNA damage checkpoint signaling  (5 genes)  IEA  
GO:0006303 [list] [network] double-strand break repair via nonhomologous end joining  (11 genes)  IEA  
GO:0000723 [list] [network] telomere maintenance  (30 genes)  IEA  
GO:0000724 [list] [network] double-strand break repair via homologous recombination  (82 genes)  IEA  
GO CC
GO:0030870 [list] [network] Mre11 complex  (4 genes)  IEA  
GO:0005634 [list] [network] nucleus  (1576 genes)  IEA  
GO MF
GO:0030145 [list] [network] manganese ion binding  (10 genes)  IEA  
GO:0004519 [list] [network] endonuclease activity  (63 genes)  IEA  
Protein XP_042918893.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 2,  mito 1  (predict for XP_042918893.1)
Subcellular
localization
TargetP
other 9  (predict for XP_042918893.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_12g556911v5

.
ath-u.5
for
MRE11

.
gma-u.5
for
100801335

.
sly-u.5
for
101264663

.
osa-u.5
for
4337137

.
zma-u.5
for
100285133

.
vvi-u.5
for
100252167

.
ppo-u.5
for
18095655

.
mtr-u.5
for
11436847

.


Ortholog ID: 8199
Species ath gma sly osa zma bra vvi ppo mtr tae tae hvu ghi bna bna cre sbi sot sot cit bdi nta nta
Symbol MRE11 LOC100801335 LOC101264663 LOC4337137 LOC100285133 LOC103844885 LOC100252167 LOC18095655 LOC11436847 LOC123047225 LOC123190879 LOC123428238 LOC107903527 LOC106434510 LOC111212774 CHLRE_12g556911v5 LOC8079542 LOC107059491 LOC102587218 LOC102624634 LOC100839664 LOC107790515 LOC107763165
Function* DNA repair and meiosis protein (Mre11) double-strand break repair protein MRE11 double-strand break repair protein MRE11 double-strand break repair protein MRE11-like double-strand break repair protein MRE11 double-strand break repair protein MRE11 Mre11 DNA repair/recombination protein double-strand break repair protein MRE11 double-strand break repair protein MRE11 double-strand break repair protein MRE11 double-strand break repair protein MRE11 double-strand break repair protein MRE11 double-strand break repair protein MRE11 double-strand break repair protein MRE11 double-strand break repair protein MRE11 uncharacterized protein double-strand break repair protein MRE11 uncharacterized LOC107059491 double-strand break repair protein MRE11 double-strand break repair protein MRE11 double-strand break repair protein MRE11 double-strand break repair protein MRE11 double-strand break repair protein MRE11
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00514 Other types of O-glycan biosynthesis 2
gma03083 Polycomb repressive complex 2
gma03440 Homologous recombination 2
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03440 Homologous recombination 2
vvi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 8
ppo03440 Homologous recombination 2
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 2
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
tae03020 RNA polymerase 4
tae04120 Ubiquitin mediated proteolysis 3
tae03440 Homologous recombination 2
tae03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 2
hvu00230 Purine metabolism 2
hvu01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 5
ghi03008 Ribosome biogenesis in eukaryotes 3
ghi03250 Viral life cycle - HIV-1 3
ghi03440 Homologous recombination 2
ghi03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03450 Non-homologous end-joining 4
bna04016 MAPK signaling pathway - plant 2
bna03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03450 Non-homologous end-joining 4
bna04016 MAPK signaling pathway - plant 2
bna03440 Homologous recombination 2
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03440 Homologous recombination 2
sot03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03420 Nucleotide excision repair 2
sot03440 Homologous recombination 2
sot03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
nta03440 Homologous recombination 2
nta03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 2
nta03450 Non-homologous end-joining 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835514 100801335 101264663 4337137 100285133 103844885 100252167 18095655 11436847 123047225 123190879 123428238 107903527 106434510 111212774 5728367 8079542 107059491 102587218 102624634 100839664 107790515 107763165
The preparation time of this page was 0.1 [sec].