ATTED-II : GeneCoexpression result

Species	Gene	Description
cre-r.1	CHLRE_03g182600v5	uncharacterized protein
ath-u.5	AT5G08450	zinc finger CCCH domain protein
gma-u.5	100775559	zinc finger CCCH domain-containing protein 13
gma-u.5	100795503	uncharacterized LOC100795503
gma-u.5	100798761	uncharacterized LOC100798761
sly-u.5	101245846	uncharacterized LOC101245846
osa-u.5	4343221	uncharacterized LOC4343221
zma-u.5	100279228	uncharacterized LOC100279228
zma-u.5	100216933	uncharacterized LOC100216933
bra-r.6	117128886	uncharacterized LOC117128886
bra-r.6	103855788	neurofilament heavy polypeptide
bra-r.6	117128884	uncharacterized LOC117128884
vvi-u.5	100259729	uncharacterized LOC100259729
ppo-u.5	18110927	uncharacterized LOC18110927
ppo-u.5	7463023	uncharacterized LOC7463023
ppo-u.5	7484105	uncharacterized LOC7484105
mtr-u.5	11418356	uncharacterized LOC11418356
mtr-u.5	25484514	DNA ligase 1
tae-r.2	123060520	zinc finger CCCH domain-containing protein 13
tae-r.2	123077599	zinc finger CCCH domain-containing protein 13
tae-r.2	123069086	zinc finger CCCH domain-containing protein 13
hvu-r.1	123443032	cylicin-1
ghi-r.1	107921994	uncharacterized LOC107921994
bna-r.1	106406843	uncharacterized LOC106406843
bna-r.1	106384967	neurofilament heavy polypeptide
bna-r.1	106384968	zinc finger CCCH domain-containing protein 13
sbi-r.1	8073511	uncharacterized LOC8073511
sbi-r.1	8081559	uncharacterized LOC8081559
sbi-r.1	8081063	uncharacterized LOC8081063
sot-r.1	102606062	uncharacterized LOC102606062
cit-r.1	102613595	uncharacterized LOC102613595
bdi-r.1	100833549	protein IWS1 homolog
nta-r.1	107801072	uncharacterized LOC107801072
nta-r.1	107783640	uncharacterized LOC107783640

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_001702953.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, mito 3, cyto_mito 2, plas 1

(predict for XP_001702953.1)

Subcellular
localization
TargetP

other 7, mito 7

(predict for XP_001702953.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	cre-r.1 for CHLRE_03g182600v5	ath-u.5 for AT5G08450	gma-u.5 for 100775559	gma-u.5 for 100795503	gma-u.5 for 100798761	sly-u.5 for 101245846	osa-u.5 for 4343221	zma-u.5 for 100279228	zma-u.5 for 100216933	bra-r.6 for 117128886	bra-r.6 for 103855788	bra-r.6 for 117128884	vvi-u.5 for 100259729	ppo-u.5 for 18110927	ppo-u.5 for 7463023	ppo-u.5 for 7484105	mtr-u.5 for 11418356	mtr-u.5 for 25484514	tae-r.2 for 123060520	tae-r.2 for 123077599	tae-r.2 for 123069086	hvu-r.1 for 123443032	ghi-r.1 for 107921994	bna-r.1 for 106406843	bna-r.1 for 106384967	bna-r.1 for 106384968	sbi-r.1 for 8073511	sbi-r.1 for 8081559	sbi-r.1 for 8081063	sot-r.1 for 102606062	cit-r.1 for 102613595	bdi-r.1 for 100833549	nta-r.1 for 107801072	nta-r.1 for 107783640

Ortholog

Ortholog ID: 4606

Species

cre

ath

gma

sly

osa

zma

bra

vvi

ppo

mtr

tae

hvu

ghi

bna

sbi

sot

cit

bdi

nta

Symbol

Function^*

uncharacterized protein

zinc finger CCCH domain protein

zinc finger CCCH domain-containing protein 13

uncharacterized LOC100795503

uncharacterized LOC100798761

uncharacterized LOC101245846

uncharacterized LOC4343221

uncharacterized LOC100279228

uncharacterized LOC100216933

neurofilament heavy polypeptide

uncharacterized LOC117128884

uncharacterized LOC117128885

uncharacterized LOC100259729

uncharacterized LOC7463023

uncharacterized LOC11418356

DNA ligase 1

zinc finger CCCH domain-containing protein 13

cylicin-1

uncharacterized LOC107921994

neurofilament heavy polypeptide

zinc finger CCCH domain-containing protein 13

uncharacterized LOC106419334

uncharacterized LOC8073511

uncharacterized LOC8081559

uncharacterized LOC8081063

uncharacterized LOC102606062

uncharacterized LOC102613595

protein IWS1 homolog

uncharacterized LOC107801072

uncharacterized LOC107783640

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03010	Ribosome	4
cre04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03013	Nucleocytoplasmic transport	3
zma03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03040	Spliceosome	2
mtr04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03013	Nucleocytoplasmic transport	4
tae03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03013	Nucleocytoplasmic transport	4
tae03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03013	Nucleocytoplasmic transport	4
tae03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	2
ghi03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03250	Viral life cycle - HIV-1	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03250	Viral life cycle - HIV-1	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03013	Nucleocytoplasmic transport	3
sbi03040	Spliceosome	3
sbi03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03060	Protein export	2
nta04141	Protein processing in endoplasmic reticulum	2
nta04075	Plant hormone signal transduction	2

Expression

Expression pattern

Entrez Gene ID^*

5728492

830744

100775559

100795503

100798761

101245846

4343221

100279228

100216933

103855788

117128884

117128885

100259729

7463023

11418356

25484514

123060520

123077599

123069086

123443032

107921994

106384967

106384968

106419334

8073511

8081559

8081063

102606062

102613595

100833549

107801072

107783640

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to CHLRE_03g182600v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_03g182600v5 (cre-r.1 coexpression data)


Species	cre	ath	gma	sly	osa	zma	bra	vvi	ppo	mtr	tae	hvu	ghi	bna	sbi	sot	cit	bdi	nta
Paralog	1	1	3	1	1	2	3	1	3	2	3	1	1	3	3	1	1	1	2

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to CHLRE_03g182600v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_03g182600v5 (cre-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**