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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT5G08450   zinc finger CCCH domain protein 
 ath-r.7   AT5G08450   zinc finger CCCH domain protein 
 ath-m.9   AT5G08450   zinc finger CCCH domain protein 
 ath-e.2   AT5G08450   zinc finger CCCH domain protein 
 ath-m.4.bio   AT5G08450   zinc finger CCCH domain protein 
 ath-m.4.hor   AT5G08450   zinc finger CCCH domain protein 
 ath-m.4.lig   AT5G08450   zinc finger CCCH domain protein 
 ath-m.4.str   AT5G08450   zinc finger CCCH domain protein 
 ath-m.4.tis   AT5G08450   zinc finger CCCH domain protein 
 bra-r.6   103855788   neurofilament heavy polypeptide 
 bra-r.6   117128885   uncharacterized LOC117128885 
 bra-r.6   117128884   uncharacterized LOC117128884 
 bna-r.1   106419334   uncharacterized LOC106419334 
 bna-r.1   106384967   neurofilament heavy polypeptide 
 bna-r.1   106384968   zinc finger CCCH domain-containing protein 13 
 ghi-r.1   107921994   uncharacterized LOC107921994 
 cit-r.1   102613595   uncharacterized LOC102613595 
 gma-u.5   100819424   zinc finger CCCH domain-containing protein 13 
 gma-u.5   100798761   uncharacterized LOC100798761 
 gma-u.5   100795503   uncharacterized LOC100795503 
 vvi-u.5   100259729   uncharacterized LOC100259729 
 ppo-u.5   18110927   uncharacterized LOC18110927 
 ppo-u.5   7484105   uncharacterized LOC7484105 
 mtr-u.5   25484514   DNA ligase 1 
 mtr-u.5   11418356   uncharacterized LOC11418356 
 sly-u.5   101245846   uncharacterized LOC101245846 
 sot-r.1   102606062   uncharacterized LOC102606062 
 nta-r.1   107801072   uncharacterized LOC107801072 
 nta-r.1   107783640   uncharacterized LOC107783640 
 osa-u.5   4343221   uncharacterized LOC4343221 
 zma-u.5   100279228   uncharacterized LOC100279228 
 zma-u.5   100216933   uncharacterized LOC100216933 
 tae-r.2   123077599   zinc finger CCCH domain-containing protein 13 
 tae-r.2   123069086   zinc finger CCCH domain-containing protein 13 
 tae-r.2   123060520   zinc finger CCCH domain-containing protein 13 
 hvu-r.1   123443032   cylicin-1 
 sbi-r.1   8081559   uncharacterized LOC8081559 
 sbi-r.1   8073511   uncharacterized LOC8073511 
 sbi-r.1   8081063   uncharacterized LOC8081063 
 bdi-r.1   100833549   protein IWS1 homolog 
 cre-r.1   CHLRE_03g182600v5   uncharacterized protein 

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Top 50 coexpressed genes to AT5G08450 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G08450 (ath-u.5 coexpression data)

CoexMap"830744"


athAT5G08450 | Entrez gene ID : 830744      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 3 3 1 1 3 1 2 2 1 1 2 1 2 3 1 3 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0080186 [list] [network] developmental vegetative growth  (11 genes)  IMP  
GO:1902074 [list] [network] response to salt  (50 genes)  IMP  
GO:0009845 [list] [network] seed germination  (111 genes)  IMP  
GO:0009908 [list] [network] flower development  (378 genes)  IMP  
GO:0009737 [list] [network] response to abscisic acid  (550 genes)  IMP  
GO CC
GO:0070822 [list] [network] Sin3-type complex  (8 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA ISM  
GO MF
GO:0004407 [list] [network] histone deacetylase activity  (17 genes)  IDA  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001031857.1 [sequence] [blastp]
NP_196462.2 [sequence] [blastp]
NP_851033.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  cyto_nucl 5  (predict for NP_001031857.1)
nucl 9,  cyto_nucl 5  (predict for NP_196462.2)
nucl 9,  cyto_nucl 5  (predict for NP_851033.1)
Subcellular
localization
TargetP
other 8,  chlo 3  (predict for NP_001031857.1)
other 8,  chlo 3  (predict for NP_196462.2)
other 8,  chlo 3  (predict for NP_851033.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT5G08450
ath-r.7
for
AT5G08450
ath-m.9
for
AT5G08450
ath-e.2
for
AT5G08450
ath-m.4.bio
for
AT5G08450
ath-m.4.hor
for
AT5G08450
ath-m.4.lig
for
AT5G08450
ath-m.4.str
for
AT5G08450
ath-m.4.tis
for
AT5G08450
bra-r.6
for
103855788
bra-r.6
for
117128885
bra-r.6
for
117128884
bna-r.1
for
106419334
bna-r.1
for
106384967
bna-r.1
for
106384968
ghi-r.1
for
107921994
cit-r.1
for
102613595
gma-u.5
for
100819424
gma-u.5
for
100798761
gma-u.5
for
100795503
vvi-u.5
for
100259729
ppo-u.5
for
18110927
ppo-u.5
for
7484105
mtr-u.5
for
25484514
mtr-u.5
for
11418356
sly-u.5
for
101245846
sot-r.1
for
102606062
nta-r.1
for
107801072
nta-r.1
for
107783640
osa-u.5
for
4343221
zma-u.5
for
100279228
zma-u.5
for
100216933
tae-r.2
for
123077599
tae-r.2
for
123069086
tae-r.2
for
123060520
hvu-r.1
for
123443032
sbi-r.1
for
8081559
sbi-r.1
for
8073511
sbi-r.1
for
8081063
bdi-r.1
for
100833549
cre-r.1
for
CHLRE_03g182600v5


Ortholog ID: 4606
Species ath bra bra bra bna bna bna ghi cit gma gma gma vvi ppo mtr mtr sly sot nta nta osa zma zma tae tae tae hvu sbi sbi sbi bdi cre
Symbol AT5G08450 LOC103855788 LOC117128885 LOC117128884 LOC106419334 LOC106384967 LOC106384968 LOC107921994 LOC102613595 LOC100798761 LOC100795503 LOC100775559 LOC100259729 LOC7463023 LOC25484514 LOC11418356 LOC101245846 LOC102606062 LOC107801072 LOC107783640 LOC4343221 LOC100279228 LOC100216933 LOC123077599 LOC123069086 LOC123060520 LOC123443032 LOC8081559 LOC8073511 LOC8081063 LOC100833549 CHLRE_03g182600v5
Function* zinc finger CCCH domain protein neurofilament heavy polypeptide uncharacterized LOC117128885 uncharacterized LOC117128884 uncharacterized LOC106419334 neurofilament heavy polypeptide zinc finger CCCH domain-containing protein 13 uncharacterized LOC107921994 uncharacterized LOC102613595 uncharacterized LOC100798761 uncharacterized LOC100795503 zinc finger CCCH domain-containing protein 13 uncharacterized LOC100259729 uncharacterized LOC7463023 DNA ligase 1 uncharacterized LOC11418356 uncharacterized LOC101245846 uncharacterized LOC102606062 uncharacterized LOC107801072 uncharacterized LOC107783640 uncharacterized LOC4343221 uncharacterized LOC100279228 uncharacterized LOC100216933 zinc finger CCCH domain-containing protein 13 zinc finger CCCH domain-containing protein 13 zinc finger CCCH domain-containing protein 13 cylicin-1 uncharacterized LOC8081559 uncharacterized LOC8073511 uncharacterized LOC8081063 protein IWS1 homolog uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
ghi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03060 Protein export 2
nta04141 Protein processing in endoplasmic reticulum 2
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 3
zma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 4
tae03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 4
tae03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 4
tae03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 3
sbi03040 Spliceosome 3
sbi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 4
cre04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 830744 103855788 117128885 117128884 106419334 106384967 106384968 107921994 102613595 100798761 100795503 100775559 100259729 7463023 25484514 11418356 101245846 102606062 107801072 107783640 4343221 100279228 100216933 123077599 123069086 123060520 123443032 8081559 8073511 8081063 100833549 5728492
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