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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_12g483700v5   uncharacterized protein 
 ath-u.5   OSB1   Primosome PriB/single-strand DNA-binding protein 
 gma-u.5   100818465   protein OSB1, mitochondrial 
 gma-u.5   100816851   protein OSB1, mitochondrial 
 gma-u.5   100796160   protein OSB2, chloroplastic 
 sly-u.5   101264117   protein OSB1, mitochondrial-like 
 sly-u.5   101244412   single-stranded DNA binding protein-like protein 
 osa-u.5   9267160   protein OSB1, mitochondrial 
 osa-u.5   4333513   protein OSB2, chloroplastic 
 zma-u.5   100276246   uncharacterized LOC100276246 
 zma-u.5   100282454   uncharacterized LOC100282454 
 zma-u.5   100283943   single-strand binding protein 
 bra-r.6   103833065   protein OSB1, mitochondrial 
 vvi-u.5   100242562   protein OSB2, chloroplastic 
 ppo-u.5   7480001   protein OSB2, chloroplastic 
 ppo-u.5   7454322   protein OSB2, chloroplastic 
 ppo-u.5   18104947   protein OSB1, mitochondrial 
 mtr-u.5   11423120   protein OSB2, chloroplastic 
 mtr-u.5   11412580   protein OSB1, mitochondrial 
 tae-r.2   123104941   protein OSB1, mitochondrial 
 tae-r.2   123086829   protein OSB1, mitochondrial 
 tae-r.2   123094501   protein OSB1, mitochondrial 
 hvu-r.1   123452143   protein OSB2, chloroplastic-like 
 hvu-r.1   123447793   protein OSB1, mitochondrial-like 
 ghi-r.1   107955470   protein OSB2, chloroplastic 
 ghi-r.1   107940679   protein OSB1, mitochondrial 
 ghi-r.1   107887792   protein OSB1, mitochondrial 
 bna-r.1   106432624   protein OSB1, mitochondrial 
 bna-r.1   125577004   protein OSB1, mitochondrial-like 
 sbi-r.1   8062244   protein OSB2, chloroplastic 
 sbi-r.1   8062513   protein OSB1, mitochondrial 
 sot-r.1   102583761   protein OSB1, mitochondrial-like 
 sot-r.1   102578435   protein OSB2, chloroplastic-like 
 cit-r.1   102627636   protein OSB1, mitochondrial 
 cit-r.1   102607845   protein OSB2, chloroplastic-like 
 bdi-r.1   100829773   protein OSB1, mitochondrial 
 bdi-r.1   100840472   protein OSB1, mitochondrial 
 nta-r.1   107824950   protein OSB1, mitochondrial 
 nta-r.1   107779956   protein OSB1, mitochondrial 
 nta-r.1   107786492   protein OSB1, mitochondrial 

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Top 50 coexpressed genes to CHLRE_12g483700v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_12g483700v5 (cre-r.1 coexpression data)

CoexMap"5728724"


creCHLRE_12g483700v5 | Entrez gene ID : 5728724      
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 1 3 2 2 3 1 1 3 2 3 2 3 2 2 2 2 2 3
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0051096 [list] [network] positive regulation of helicase activity  (1 genes)  IEA  
GO:0006264 [list] [network] mitochondrial DNA replication  (3 genes)  IEA  
GO CC
GO:0042645 [list] [network] mitochondrial nucleoid  (1 genes)  IEA  
GO MF
GO:0003697 [list] [network] single-stranded DNA binding  (46 genes)  IEA  
Protein XP_001703164.1 [sequence] [blastp]
XP_042917895.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  mito 1  (predict for XP_001703164.1)
chlo 9,  mito 1  (predict for XP_042917895.1)
Subcellular
localization
TargetP
mito 8  (predict for XP_001703164.1)
mito 8  (predict for XP_042917895.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_12g483700v5
ath-u.5
for
OSB1
gma-u.5
for
100818465
gma-u.5
for
100816851
gma-u.5
for
100796160
sly-u.5
for
101264117
sly-u.5
for
101244412
osa-u.5
for
9267160
osa-u.5
for
4333513
zma-u.5
for
100276246
zma-u.5
for
100282454
zma-u.5
for
100283943
bra-r.6
for
103833065
vvi-u.5
for
100242562
ppo-u.5
for
7480001
ppo-u.5
for
7454322
ppo-u.5
for
18104947
mtr-u.5
for
11423120
mtr-u.5
for
11412580
tae-r.2
for
123104941
tae-r.2
for
123086829
tae-r.2
for
123094501
hvu-r.1
for
123452143
hvu-r.1
for
123447793
ghi-r.1
for
107955470
ghi-r.1
for
107940679
ghi-r.1
for
107887792
bna-r.1
for
106432624
bna-r.1
for
125577004
sbi-r.1
for
8062244
sbi-r.1
for
8062513
sot-r.1
for
102583761
sot-r.1
for
102578435
cit-r.1
for
102627636
cit-r.1
for
102607845
bdi-r.1
for
100829773
bdi-r.1
for
100840472
nta-r.1
for
107824950
nta-r.1
for
107779956
nta-r.1
for
107786492


Ortholog ID: 3872
Species cre ath gma gma gma sly sly osa osa zma zma zma bra vvi ppo ppo ppo mtr mtr tae tae tae hvu hvu ghi ghi ghi bna bna sbi sbi sot sot cit cit bdi bdi nta nta nta
Symbol CHLRE_12g483700v5 OSB1 LOC100818465 LOC100816851 LOC100796160 LOC101264117 LOC101244412 LOC9267160 LOC4333513 LOC100276246 LOC100282454 LOC100283943 LOC103833065 LOC100242562 LOC7480001 LOC7454322 LOC18104947 LOC11423120 LOC11412580 LOC123096145 LOC123113243 LOC123122750 LOC123452143 LOC123447793 LOC107955470 LOC107940679 LOC107941655 LOC106432624 LOC125577004 LOC8062244 LOC8062513 LOC102583761 LOC102578435 LOC102627636 LOC102607845 LOC100829773 LOC100840472 LOC107824950 LOC107779956 LOC107810727
Function* uncharacterized protein Primosome PriB/single-strand DNA-binding protein protein OSB1, mitochondrial protein OSB1, mitochondrial protein OSB2, chloroplastic protein OSB1, mitochondrial-like single-stranded DNA binding protein-like protein protein OSB1, mitochondrial protein OSB2, chloroplastic uncharacterized LOC100276246 uncharacterized LOC100282454 single-strand binding protein protein OSB1, mitochondrial protein OSB2, chloroplastic protein OSB2, chloroplastic protein OSB2, chloroplastic protein OSB1, mitochondrial protein OSB2, chloroplastic protein OSB1, mitochondrial protein OSB1, mitochondrial protein OSB2, chloroplastic protein OSB1, mitochondrial protein OSB2, chloroplastic-like protein OSB1, mitochondrial-like protein OSB2, chloroplastic protein OSB1, mitochondrial protein OSB2, chloroplastic protein OSB1, mitochondrial protein OSB1, mitochondrial-like protein OSB2, chloroplastic protein OSB1, mitochondrial protein OSB1, mitochondrial-like protein OSB2, chloroplastic-like protein OSB1, mitochondrial protein OSB2, chloroplastic-like protein OSB1, mitochondrial protein OSB1, mitochondrial protein OSB1, mitochondrial protein OSB1, mitochondrial protein OSB1, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 3
cre00240 Pyrimidine metabolism 2
cre01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00760 Nicotinate and nicotinamide metabolism 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
sly03018 RNA degradation 2
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 6
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 3
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00562 Inositol phosphate metabolism 2
mtr04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03250 Viral life cycle - HIV-1 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03440 Homologous recombination 3
tae00240 Pyrimidine metabolism 2
tae01232 Nucleotide metabolism 2
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03440 Homologous recombination 2
tae00240 Pyrimidine metabolism 2
tae01232 Nucleotide metabolism 2
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 4
ghi00520 Amino sugar and nucleotide sugar metabolism 2
ghi00561 Glycerolipid metabolism 2
ghi00566 Sulfoquinovose metabolism 2
ghi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 4
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 3
bna03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00510 N-Glycan biosynthesis 2
cit00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00240 Pyrimidine metabolism 2
bdi01232 Nucleotide metabolism 2
bdi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
nta00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 4
nta03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5728724 841183 100818465 100816851 100796160 101264117 101244412 9267160 4333513 100276246 100282454 100283943 103833065 100242562 7480001 7454322 18104947 11423120 11412580 123096145 123113243 123122750 123452143 123447793 107955470 107940679 107941655 106432624 125577004 8062244 8062513 102583761 102578435 102627636 102607845 100829773 100840472 107824950 107779956 107810727
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