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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_01g036600v5   uncharacterized protein 
 cre-r.1   CHLRE_07g340750v5   uncharacterized protein 
 ath-u.5   SDN1   small RNA degrading nuclease 1 
 ath-u.5   SDN2   small RNA degrading nuclease 2 
 gma-u.5   100785565   small RNA degrading nuclease 3 
 sly-u.5   101248438   small RNA degrading nuclease 1-like 
 osa-u.5   4337228   small RNA degrading nuclease 1 
 zma-u.5   103645842   small RNA degrading nuclease 1 
 bra-r.6   103829525   small RNA degrading nuclease 3 
 bra-r.6   103829878   small RNA degrading nuclease 3-like 
 bra-r.6   103840928   small RNA degrading nuclease 1 
 vvi-u.5   100254172   small RNA degrading nuclease 1 
 ppo-u.5   7483093   small RNA degrading nuclease 1 
 mtr-u.5   25485770   small RNA degrading nuclease 1 
 tae-r.2   123047099   small RNA degrading nuclease 1 
 tae-r.2   123050356   small RNA degrading nuclease 3 
 hvu-r.1   123428130   small RNA degrading nuclease 1-like 
 ghi-r.1   107913580   small RNA degrading nuclease 1 
 ghi-r.1   107891333   small RNA degrading nuclease 3 
 bna-r.1   106418773   small RNA degrading nuclease 1-like 
 sbi-r.1   8068490   small RNA degrading nuclease 1 
 sot-r.1   102581137   small RNA degrading nuclease 1-like 
 cit-r.1   102628898   small RNA degrading nuclease 3 
 bdi-r.1   100838655   small RNA degrading nuclease 1 
 nta-r.1   107816016   small RNA degrading nuclease 1-like 
 nta-r.1   107789081   small RNA degrading nuclease 1 
 nta-r.1   107789218   small RNA degrading nuclease 1-like 

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Top 50 coexpressed genes to CHLRE_01g036600v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_01g036600v5 (cre-r.1 coexpression data)

CoexMap"66052100"


creCHLRE_01g036600v5 | Entrez gene ID : 66052100    
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 2 2 1 1 1 1 3 1 1 1 2 1 2 1 1 1 1 1 3
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (1576 genes)  IEA  
GO MF
GO:0004527 [list] [network] exonuclease activity  (61 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (1484 genes)  IEA  
Protein XP_042928644.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 4  (predict for XP_042928644.1)
Subcellular
localization
TargetP
other 7  (predict for XP_042928644.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_01g036600v5
cre-r.1
for
CHLRE_07g340750v5
ath-u.5
for
SDN1
ath-u.5
for
SDN2
gma-u.5
for
100785565
sly-u.5
for
101248438
osa-u.5
for
4337228
zma-u.5
for
103645842
bra-r.6
for
103829525
bra-r.6
for
103829878
bra-r.6
for
103840928
vvi-u.5
for
100254172
ppo-u.5
for
7483093
mtr-u.5
for
25485770
tae-r.2
for
123047099
tae-r.2
for
123050356
hvu-r.1
for
123428130
ghi-r.1
for
107913580
ghi-r.1
for
107891333
bna-r.1
for
106418773
sbi-r.1
for
8068490
sot-r.1
for
102581137
cit-r.1
for
102628898
bdi-r.1
for
100838655
nta-r.1
for
107816016
nta-r.1
for
107789081
nta-r.1
for
107789218


Ortholog ID: 4405
Species cre cre ath ath gma sly osa zma bra bra bra vvi ppo mtr tae tae hvu ghi ghi bna bna bna sbi sot cit bdi nta nta nta
Symbol CHLRE_01g036600v5 CHLRE_07g340750v5 SDN1 SDN2 LOC100785565 LOC101248438 LOC4337228 LOC103645842 LOC103829525 LOC103829878 LOC103840928 LOC100254172 LOC7483093 LOC25485770 LOC123047099 LOC123050356 LOC123428130 LOC107913580 LOC107891333 LOC106390333 LOC106346009 LOC106366788 LOC8068490 LOC102581137 LOC102628898 LOC100838655 LOC107816016 LOC107789081 LOC107798545
Function* uncharacterized protein uncharacterized protein small RNA degrading nuclease 1 small RNA degrading nuclease 2 small RNA degrading nuclease 3 small RNA degrading nuclease 1-like small RNA degrading nuclease 1 small RNA degrading nuclease 1 small RNA degrading nuclease 3 small RNA degrading nuclease 3-like small RNA degrading nuclease 1 small RNA degrading nuclease 1 small RNA degrading nuclease 1 small RNA degrading nuclease 1 small RNA degrading nuclease 1 small RNA degrading nuclease 3 small RNA degrading nuclease 1-like small RNA degrading nuclease 1 small RNA degrading nuclease 3 small RNA degrading nuclease 3 small RNA degrading nuclease 2-like small RNA degrading nuclease 3-like small RNA degrading nuclease 1 small RNA degrading nuclease 1-like small RNA degrading nuclease 3 small RNA degrading nuclease 1 small RNA degrading nuclease 1-like small RNA degrading nuclease 1 small RNA degrading nuclease 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 8
bra03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 2
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 4
mtr00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 10
tae04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 5
ghi03008 Ribosome biogenesis in eukaryotes 2
ghi03020 RNA polymerase 2
ghi03420 Nucleotide excision repair 2
ghi00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00510 N-Glycan biosynthesis 2
ghi00513 Various types of N-glycan biosynthesis 2
ghi03008 Ribosome biogenesis in eukaryotes 2
ghi03050 Proteasome 2
ghi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 5
bna03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 3
bna03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
nta00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 66052100 5718102 824172 830437 100785565 101248438 4337228 103645842 103829525 103829878 103840928 100254172 7483093 25485770 123047099 123050356 123428130 107913580 107891333 106390333 106346009 106366788 8068490 102581137 102628898 100838655 107816016 107789081 107798545
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