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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_03g169950v5   uncharacterized protein 
 cre-r.1   CHLRE_17g709550v5   uncharacterized protein 
 cre-r.1   CHLRE_05g239250v5   uncharacterized protein 
 ath-u.5   MEE27   Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein 
 ath-u.5   AT2G38950   Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein 
 ath-u.5   JMJ14   JUMONJI 14 
 gma-u.5   100801775   lysine-specific demethylase JMJ18 
 gma-u.5   100800271   putative lysine-specific demethylase JMJ16 
 gma-u.5   100814590   lysine-specific demethylase JMJ18 
 sly-u.5   101265508   lysine-specific demethylase JMJ18 
 sly-u.5   101246913   putative lysine-specific demethylase JMJ16 
 sly-u.5   JMJ6   lysine-specific demethylase JMJ6 
 osa-u.5   4338043   lysine-specific demethylase JMJ703-like 
 osa-u.5   4338351   lysine-specific demethylase JMJ18 
 zma-u.5   100194382   uncharacterized LOC100194382 
 zma-u.5   103631461   lysine-specific demethylase JMJ18 
 zma-u.5   109939226   lysine-specific demethylase JMJ703-like 
 bra-r.6   103858232   probable lysine-specific demethylase JMJ14 
 bra-r.6   103836382   putative lysine-specific demethylase JMJ16 
 vvi-u.5   100249688   putative lysine-specific demethylase JMJ16 
 vvi-u.5   100252938   lysine-specific demethylase JMJ18 
 vvi-u.5   100243365   putative lysine-specific demethylase JMJ16 
 ppo-u.5   18104088   putative lysine-specific demethylase JMJ16 
 ppo-u.5   7487182   putative lysine-specific demethylase JMJ16 
 ppo-u.5   7479746   putative lysine-specific demethylase JMJ16 
 mtr-u.5   25484581   putative lysine-specific demethylase JMJ16 
 mtr-u.5   25499272   putative lysine-specific demethylase JMJ16 
 tae-r.2   123070347   lysine-specific demethylase JMJ703 
 tae-r.2   123116559   lysine-specific demethylase JMJ18 
 tae-r.2   123149162   lysine-specific demethylase JMJ703 
 hvu-r.1   123427966   lysine-specific demethylase JMJ18-like 
 hvu-r.1   123452400   lysine-specific demethylase JMJ703-like 
 ghi-r.1   107941170   lysine-specific demethylase JMJ18 
 ghi-r.1   107930371   lysine-specific demethylase JMJ18 
 ghi-r.1   107902743   lysine-specific demethylase JMJ18 
 bna-r.1   106450981   probable inactive lysine-specific demethylase JMJ19 
 sbi-r.1   8054516   lysine-specific demethylase JMJ18 
 sbi-r.1   8056417   lysine-specific demethylase JMJ703 
 sbi-r.1   110431008   lysine-specific demethylase JMJ703-like 
 sot-r.1   102605431   lysine-specific demethylase JMJ18 
 sot-r.1   102580166   putative lysine-specific demethylase JMJ16 
 sot-r.1   102593415   putative lysine-specific demethylase JMJ16 
 cit-r.1   102607598   lysine-specific demethylase JMJ14 
 cit-r.1   102609905   putative lysine-specific demethylase JMJ16 
 cit-r.1   102610903   putative lysine-specific demethylase JMJ16 
 bdi-r.1   100844367   lysine-specific demethylase JMJ703 
 bdi-r.1   100828086   lysine-specific demethylase JMJ18 
 bdi-r.1   100826668   lysine-specific demethylase JMJ18 
 nta-r.1   142177301   lysine-specific demethylase JMJ14-like 
 nta-r.1   107813042   putative lysine-specific demethylase JMJ16 
 nta-r.1   107810799   putative lysine-specific demethylase JMJ16 

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Top 50 coexpressed genes to CHLRE_03g169950v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_03g169950v5 (cre-r.1 coexpression data)

CoexMap"66052826"


creCHLRE_03g169950v5 | Entrez gene ID : 66052826    
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 3 3 3 3 2 3 2 3 3 2 3 2 3 1 3 3 3 3 3
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006338 [list] [network] chromatin remodeling  (106 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (1576 genes)  IEA  
GO MF
GO:0032452 [list] [network] histone demethylase activity  (11 genes)  IEA  
Protein XP_042925985.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_042925985.1)
Subcellular
localization
TargetP
scret 7  (predict for XP_042925985.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_03g169950v5
cre-r.1
for
CHLRE_17g709550v5
cre-r.1
for
CHLRE_05g239250v5
ath-u.5
for
MEE27
ath-u.5
for
AT2G38950
ath-u.5
for
JMJ14
gma-u.5
for
100801775
gma-u.5
for
100800271
gma-u.5
for
100814590
sly-u.5
for
101265508
sly-u.5
for
101246913
sly-u.5
for
JMJ6
osa-u.5
for
4338043
osa-u.5
for
4338351
zma-u.5
for
100194382
zma-u.5
for
103631461
zma-u.5
for
109939226
bra-r.6
for
103858232
bra-r.6
for
103836382
vvi-u.5
for
100249688
vvi-u.5
for
100252938
vvi-u.5
for
100243365
ppo-u.5
for
18104088
ppo-u.5
for
7487182
ppo-u.5
for
7479746
mtr-u.5
for
25484581
mtr-u.5
for
25499272
tae-r.2
for
123070347
tae-r.2
for
123116559
tae-r.2
for
123149162
hvu-r.1
for
123427966
hvu-r.1
for
123452400
ghi-r.1
for
107941170
ghi-r.1
for
107930371
ghi-r.1
for
107902743
bna-r.1
for
106450981
sbi-r.1
for
8054516
sbi-r.1
for
8056417
sbi-r.1
for
110431008
sot-r.1
for
102605431
sot-r.1
for
102580166
sot-r.1
for
102593415
cit-r.1
for
102607598
cit-r.1
for
102609905
cit-r.1
for
102610903
bdi-r.1
for
100844367
bdi-r.1
for
100828086
bdi-r.1
for
100826668
nta-r.1
for
142177301
nta-r.1
for
107813042
nta-r.1
for
107810799


Ortholog ID: 826
Species cre cre cre ath ath ath gma gma sly sly sly osa osa zma zma zma bra bra vvi vvi vvi ppo ppo ppo mtr mtr tae tae tae hvu hvu ghi ghi ghi bna sbi sbi sbi sot sot sot cit cit cit bdi bdi bdi nta nta nta
Symbol CHLRE_03g169950v5 CHLRE_17g709550v5 CHLRE_05g239250v5 AT2G38950 PKDM7D JMJ18 LOC100800271 LOC100804864 LOC101265508 LOC101246913 JMJ6 LOC4338043 LOC4338351 LOC100194382 LOC103631461 LOC109939226 LOC103858232 LOC103840300 LOC100249688 LOC100252938 LOC100243365 LOC18104088 LOC18095778 LOC18103470 LOC25484581 LOC25486667 LOC123070347 LOC123116559 LOC123149162 LOC123427966 LOC123452400 LOC107930371 LOC107902743 LOC107926805 LOC106411265 LOC8054516 LOC8056417 LOC110431008 LOC102605431 LOC102580166 LOC102593415 LOC102607598 LOC102609905 LOC102610903 LOC100844367 LOC100828086 LOC100826668 LOC142177301 LOC107780699 LOC142179375
Function* uncharacterized protein uncharacterized protein uncharacterized protein Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein putative lysine-specific demethylase JMJ16 putative lysine-specific demethylase JMJ16 lysine-specific demethylase JMJ18 putative lysine-specific demethylase JMJ16 lysine-specific demethylase JMJ6 lysine-specific demethylase JMJ703-like lysine-specific demethylase JMJ18 uncharacterized LOC100194382 lysine-specific demethylase JMJ18 lysine-specific demethylase JMJ703-like probable lysine-specific demethylase JMJ14 lysine-specific demethylase JMJ18 putative lysine-specific demethylase JMJ16 lysine-specific demethylase JMJ18 putative lysine-specific demethylase JMJ16 putative lysine-specific demethylase JMJ16 lysine-specific demethylase JMJ18 lysine-specific demethylase JMJ18 putative lysine-specific demethylase JMJ16 lysine-specific demethylase JMJ18 lysine-specific demethylase JMJ703 lysine-specific demethylase JMJ18 lysine-specific demethylase JMJ703 lysine-specific demethylase JMJ18-like lysine-specific demethylase JMJ703-like lysine-specific demethylase JMJ18 lysine-specific demethylase JMJ18 putative lysine-specific demethylase JMJ16 probable inactive lysine-specific demethylase JMJ19 lysine-specific demethylase JMJ18 lysine-specific demethylase JMJ703 lysine-specific demethylase JMJ703-like lysine-specific demethylase JMJ18 putative lysine-specific demethylase JMJ16 putative lysine-specific demethylase JMJ16 lysine-specific demethylase JMJ14 putative lysine-specific demethylase JMJ16 putative lysine-specific demethylase JMJ16 lysine-specific demethylase JMJ703 lysine-specific demethylase JMJ18 lysine-specific demethylase JMJ18 lysine-specific demethylase JMJ14-like lysine-specific demethylase JMJ18 putative lysine-specific demethylase JMJ16
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03030 DNA replication 2
cre03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03083 Polycomb repressive complex 3
gma03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00010 Glycolysis / Gluconeogenesis 2
sly00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00230 Purine metabolism 2
zma00240 Pyrimidine metabolism 2
zma01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 2
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00730 Thiamine metabolism 2
ppo01240 Biosynthesis of cofactors 2
ppo04141 Protein processing in endoplasmic reticulum 2
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 2
tae03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00250 Alanine, aspartate and glutamate metabolism 2
ghi00910 Nitrogen metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00061 Fatty acid biosynthesis 4
ghi01040 Biosynthesis of unsaturated fatty acids 4
ghi01212 Fatty acid metabolism 4
ghi04141 Protein processing in endoplasmic reticulum 3
ghi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi02010 ABC transporters 4
ghi00250 Alanine, aspartate and glutamate metabolism 2
ghi00910 Nitrogen metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04712 Circadian rhythm - plant 2
bna00564 Glycerophospholipid metabolism 2
bna04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 4
sot00010 Glycolysis / Gluconeogenesis 3
sot00040 Pentose and glucuronate interconversions 2
sot00053 Ascorbate and aldarate metabolism 2
sot00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 2
nta04075 Plant hormone signal transduction 2
nta00190 Oxidative phosphorylation 2
nta02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 4
nta04075 Plant hormone signal transduction 4
nta00920 Sulfur metabolism 2
nta02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 5
nta05100 Bacterial invasion of epithelial cells 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 66052826 5717153 66053412 818480 837384 839963 100800271 100804864 101265508 101246913 101244589 4338043 4338351 100194382 103631461 109939226 103858232 103840300 100249688 100252938 100243365 18104088 18095778 18103470 25484581 25486667 123070347 123116559 123149162 123427966 123452400 107930371 107902743 107926805 106411265 8054516 8056417 110431008 102605431 102580166 102593415 102607598 102609905 102610903 100844367 100828086 100826668 142177301 107780699 142179375
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