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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_06g249250v5   uncharacterized protein 
 ath-u.5   AT4G22380   Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 
 ath-u.5   AT5G20160   Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 
 gma-u.5   100798912   NHP2-like protein 1 
 gma-u.5   100527424   uncharacterized LOC100527424 
 gma-u.5   100305817   uncharacterized LOC100305817 
 sly-u.5   101244799   uncharacterized LOC101244799 
 sly-u.5   101267649   uncharacterized LOC101267649 
 osa-u.5   4332209   uncharacterized LOC4332209 
 osa-u.5   4348007   uncharacterized LOC4348007 
 zma-u.5   100303837   NHP2-like protein 1 
 zma-u.5   100282785   uncharacterized LOC100282785 
 zma-u.5   103633413   uncharacterized LOC103633413 
 bra-r.6   103860007   NHP2-like protein 1 
 bra-r.6   103868150   NHP2-like protein 1 
 vvi-u.5   100241010   uncharacterized LOC100241010 
 vvi-u.5   100252442   uncharacterized LOC100252442 
 ppo-u.5   7467445   uncharacterized LOC7467445 
 ppo-u.5   18104497   uncharacterized LOC18104497 
 mtr-u.5   11441647   NHP2-like protein 1 
 mtr-u.5   25479574   NHP2-like protein 1 
 tae-r.2   123085205   NHP2-like protein 1 
 tae-r.2   123098104   NHP2-like protein 1 
 tae-r.2   123092812   NHP2-like protein 1 
 hvu-r.1   123449187   NHP2-like protein 1 
 ghi-r.1   107962625   NHP2-like protein 1 
 ghi-r.1   107909217   NHP2-like protein 1 
 ghi-r.1   121219998   NHP2-like protein 1 
 bna-r.1   106436275   NHP2-like protein 1 
 bna-r.1   106437622   NHP2-like protein 1 
 bna-r.1   106438771   NHP2-like protein 1 
 sbi-r.1   8085664   NHP2-like protein 1 
 sbi-r.1   8078864   NHP2-like protein 1 
 sot-r.1   102588744   NHP2-like protein 1 
 sot-r.1   102583911   NHP2-like protein 1 
 cit-r.1   102625613   13 kDa ribonucleoprotein-associated protein 
 bdi-r.1   100844088   NHP2-like protein 1 
 bdi-r.1   100824839   NHP2-like protein 1 
 nta-r.1   107829442   uncharacterized LOC107829442 
 nta-r.1   107821552   uncharacterized LOC107821552 
 nta-r.1   107801239   uncharacterized LOC107801239 

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Top 50 coexpressed genes to CHLRE_06g249250v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_06g249250v5 (cre-r.1 coexpression data)

CoexMap"66053519"


creCHLRE_06g249250v5 | Entrez gene ID : 66053519    
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 2 3 2 2 3 2 2 2 2 3 1 3 3 2 2 1 2 3
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cre03008 [list] [network] Ribosome biogenesis in eukaryotes (47 genes)
cre03040 [list] [network] Spliceosome (105 genes)
GO BP
GO:0030490 [list] [network] maturation of SSU-rRNA  (40 genes)  IEA  
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (103 genes)  IEA  
GO:0042254 [list] [network] ribosome biogenesis  (274 genes)  IEA  
GO CC
GO:0031428 [list] [network] box C/D methylation guide snoRNP complex  (4 genes)  IEA  
GO:0046540 [list] [network] U4/U6 x U5 tri-snRNP complex  (18 genes)  IEA  
GO:0071011 [list] [network] precatalytic spliceosome  (26 genes)  IEA  
GO:0032040 [list] [network] small-subunit processome  (35 genes)  IEA  
GO:0005730 [list] [network] nucleolus  (152 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (670 genes)  IEA  
Protein XP_042923272.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  cyto_nucl 4,  cysk_nucl 1,  nucl 1  (predict for XP_042923272.1)
Subcellular
localization
TargetP
other 8  (predict for XP_042923272.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_06g249250v5
ath-u.5
for
AT4G22380
ath-u.5
for
AT5G20160
gma-u.5
for
100798912
gma-u.5
for
100527424
gma-u.5
for
100305817
sly-u.5
for
101244799
sly-u.5
for
101267649
osa-u.5
for
4332209
osa-u.5
for
4348007
zma-u.5
for
100303837
zma-u.5
for
100282785
zma-u.5
for
103633413
bra-r.6
for
103860007
bra-r.6
for
103868150
vvi-u.5
for
100241010
vvi-u.5
for
100252442
ppo-u.5
for
7467445
ppo-u.5
for
18104497
mtr-u.5
for
11441647
mtr-u.5
for
25479574
tae-r.2
for
123085205
tae-r.2
for
123098104
tae-r.2
for
123092812
hvu-r.1
for
123449187
ghi-r.1
for
107962625
ghi-r.1
for
107909217
ghi-r.1
for
121219998
bna-r.1
for
106436275
bna-r.1
for
106437622
bna-r.1
for
106438771
sbi-r.1
for
8085664
sbi-r.1
for
8078864
sot-r.1
for
102588744
sot-r.1
for
102583911
cit-r.1
for
102625613
bdi-r.1
for
100844088
bdi-r.1
for
100824839
nta-r.1
for
107829442
nta-r.1
for
107821552
nta-r.1
for
107801239


Ortholog ID: 3027
Species cre ath ath gma gma gma sly sly osa osa zma zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae tae hvu ghi ghi ghi bna bna sbi sbi sot sot cit bdi bdi nta nta nta
Symbol CHLRE_06g249250v5 AT4G22380 AT5G20160 LOC100798912 LOC100527424 LOC100305817 LOC101244799 LOC101267649 LOC4332209 LOC4348007 LOC100303837 LOC100282785 LOC103633413 LOC103860007 LOC103839875 LOC100241010 LOC100252442 LOC7467445 LOC18104497 LOC11441647 LOC25479574 LOC123085205 LOC123098104 LOC123092812 LOC123449187 LOC107962625 LOC107909217 LOC107901289 LOC106381595 LOC106381583 LOC8085664 LOC8078864 LOC102588744 LOC102583911 LOC102625613 LOC100844088 LOC100824839 LOC107829442 LOC107801239 LOC107788355
Function* uncharacterized protein Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein NHP2-like protein 1 uncharacterized LOC100527424 uncharacterized LOC100305817 uncharacterized LOC101244799 uncharacterized LOC101267649 uncharacterized LOC4332209 uncharacterized LOC4348007 NHP2-like protein 1 uncharacterized LOC100282785 uncharacterized LOC103633413 NHP2-like protein 1 NHP2-like protein 1 uncharacterized LOC100241010 uncharacterized LOC100252442 uncharacterized LOC7467445 uncharacterized LOC18104497 NHP2-like protein 1 NHP2-like protein 1 NHP2-like protein 1 NHP2-like protein 1 NHP2-like protein 1 NHP2-like protein 1 NHP2-like protein 1 NHP2-like protein 1 NHP2-like protein 1 NHP2-like protein 1 NHP2-like protein 1 NHP2-like protein 1 NHP2-like protein 1 NHP2-like protein 1 NHP2-like protein 1 13 kDa ribonucleoprotein-associated protein NHP2-like protein 1 NHP2-like protein 1 uncharacterized LOC107829442 uncharacterized LOC107801239 uncharacterized LOC107788355
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 7
ath03010 Ribosome 4
ath03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 5
ath03010 Ribosome 3
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 10
gma03008 Ribosome biogenesis in eukaryotes 3
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 14
gma03008 Ribosome biogenesis in eukaryotes 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 14
gma03008 Ribosome biogenesis in eukaryotes 3
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 8
sly03010 Ribosome 2
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 8
sly03010 Ribosome 5
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 16
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 13
zma03008 Ribosome biogenesis in eukaryotes 3
zma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 18
zma03008 Ribosome biogenesis in eukaryotes 2
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 10
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 11
bra03040 Spliceosome 3
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 14
vvi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 9
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 9
ppo03008 Ribosome biogenesis in eukaryotes 3
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 16
ppo03008 Ribosome biogenesis in eukaryotes 3
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 15
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 4
tae03008 Ribosome biogenesis in eukaryotes 4
tae03040 Spliceosome 3
tae03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 6
tae03008 Ribosome biogenesis in eukaryotes 3
tae03040 Spliceosome 3
tae03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 6
tae03008 Ribosome biogenesis in eukaryotes 3
tae03040 Spliceosome 3
tae03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 6
hvu03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
ghi03040 Spliceosome 4
ghi03010 Ribosome 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
ghi03040 Spliceosome 4
ghi03010 Ribosome 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
ghi03040 Spliceosome 4
ghi03010 Ribosome 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 10
bna03008 Ribosome biogenesis in eukaryotes 8
bna03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 12
bna03040 Spliceosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 12
sbi04120 Ubiquitin mediated proteolysis 3
sbi03008 Ribosome biogenesis in eukaryotes 2
sbi03040 Spliceosome 2
sbi00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 15
sbi04120 Ubiquitin mediated proteolysis 3
sbi03008 Ribosome biogenesis in eukaryotes 2
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 4
sot03010 Ribosome 2
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 4
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 3
cit03083 Polycomb repressive complex 2
cit04120 Ubiquitin mediated proteolysis 2
cit04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 8
bdi03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 5
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 5
nta03008 Ribosome biogenesis in eukaryotes 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 5
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
nta03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 66053519 828333 832138 100798912 100527424 100305817 101244799 101267649 4332209 4348007 100303837 100282785 103633413 103860007 103839875 100241010 100252442 7467445 18104497 11441647 25479574 123085205 123098104 123092812 123449187 107962625 107909217 107901289 106381595 106381583 8085664 8078864 102588744 102583911 102625613 100844088 100824839 107829442 107801239 107788355
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