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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   103633413   uncharacterized LOC103633413 
 zma-r.6   103633413   uncharacterized LOC103633413 
 zma-u.5   100282785   uncharacterized LOC100282785 
 zma-u.5   100303837   NHP2-like protein 1 
 sbi-r.1   8078864   NHP2-like protein 1 
 sbi-r.1   8085664   NHP2-like protein 1 
 osa-u.5   4332209   uncharacterized LOC4332209 
 osa-u.5   4348007   uncharacterized LOC4348007 
 tae-r.2   123085205   NHP2-like protein 1 
 tae-r.2   123092812   NHP2-like protein 1 
 tae-r.2   123098104   NHP2-like protein 1 
 hvu-r.1   123449187   NHP2-like protein 1 
 bdi-r.1   100824839   NHP2-like protein 1 
 bdi-r.1   100844088   NHP2-like protein 1 
 ath-u.5   AT4G22380   Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 
 ath-u.5   AT5G20160   Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 
 gma-u.5   100817627   NHP2-like protein 1 
 gma-u.5   100798912   NHP2-like protein 1 
 gma-u.5   100527424   uncharacterized LOC100527424 
 sly-u.5   101244799   uncharacterized LOC101244799 
 sly-u.5   101267649   uncharacterized LOC101267649 
 bra-r.6   103868150   NHP2-like protein 1 
 bra-r.6   103858643   NHP2-like protein 1 
 vvi-u.5   100252442   uncharacterized LOC100252442 
 vvi-u.5   100241010   uncharacterized LOC100241010 
 ppo-u.5   18104497   uncharacterized LOC18104497 
 ppo-u.5   7467445   uncharacterized LOC7467445 
 mtr-u.5   25479574   NHP2-like protein 1 
 mtr-u.5   11441647   NHP2-like protein 1 
 ghi-r.1   121219998   NHP2-like protein 1 
 ghi-r.1   107901289   NHP2-like protein 1 
 ghi-r.1   107962625   NHP2-like protein 1 
 bna-r.1   106366115   NHP2-like protein 1 
 bna-r.1   106438771   NHP2-like protein 1 
 bna-r.1   106437622   NHP2-like protein 1 
 sot-r.1   102583911   NHP2-like protein 1 
 sot-r.1   102588744   NHP2-like protein 1 
 cit-r.1   102625613   13 kDa ribonucleoprotein-associated protein 
 nta-r.1   107829442   uncharacterized LOC107829442 
 nta-r.1   107821552   uncharacterized LOC107821552 
 nta-r.1   107801239   uncharacterized LOC107801239 
 cre-r.1   CHLRE_06g249250v5   uncharacterized protein 

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Top 50 coexpressed genes to 103633413 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103633413 (zma-u.5 coexpression data)

CoexMap"103633413"


zmaLOC103633413 | Entrez gene ID : 103633413    
Species zma sbi osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 4 2 2 3 1 2 2 3 2 2 2 2 2 3 3 2 1 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG zma03008 [list] [network] Ribosome biogenesis in eukaryotes (2556 genes)
zma03040 [list] [network] Spliceosome (506 genes)
GO BP
GO:0042254 [list] [network] ribosome biogenesis  (299 genes)  IEA  
GO CC
GO:0005730 [list] [network] nucleolus  (246 genes)  IEA  
GO:1990904 [list] [network] ribonucleoprotein complex  (614 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (1549 genes)  IEA  
Protein NP_001355755.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto 4,  chlo 1  (predict for NP_001355755.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001355755.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
103633413
zma-r.6
for
103633413
zma-u.5
for
100282785
zma-u.5
for
100303837
sbi-r.1
for
8078864
sbi-r.1
for
8085664
osa-u.5
for
4332209
osa-u.5
for
4348007
tae-r.2
for
123085205
tae-r.2
for
123092812
tae-r.2
for
123098104
hvu-r.1
for
123449187
bdi-r.1
for
100824839
bdi-r.1
for
100844088
ath-u.5
for
AT4G22380
ath-u.5
for
AT5G20160
gma-u.5
for
100817627
gma-u.5
for
100798912
gma-u.5
for
100527424
sly-u.5
for
101244799
sly-u.5
for
101267649
bra-r.6
for
103868150
bra-r.6
for
103858643
vvi-u.5
for
100252442
vvi-u.5
for
100241010
ppo-u.5
for
18104497
ppo-u.5
for
7467445
mtr-u.5
for
25479574
mtr-u.5
for
11441647
ghi-r.1
for
121219998
ghi-r.1
for
107901289
ghi-r.1
for
107962625
bna-r.1
for
106366115
bna-r.1
for
106438771
bna-r.1
for
106437622
sot-r.1
for
102583911
sot-r.1
for
102588744
cit-r.1
for
102625613
nta-r.1
for
107829442
nta-r.1
for
107821552
nta-r.1
for
107801239
cre-r.1
for
CHLRE_06g249250v5


Ortholog ID: 3027
Species zma zma zma sbi sbi osa osa tae tae tae hvu bdi bdi ath ath gma gma gma sly sly bra bra vvi vvi ppo ppo mtr mtr ghi ghi ghi bna bna sot sot cit nta nta nta cre
Symbol LOC103633413 LOC100282785 LOC100303837 LOC8078864 LOC8085664 LOC4332209 LOC4348007 LOC123085205 LOC123092812 LOC123098104 LOC123449187 LOC100824839 LOC100844088 AT4G22380 AT5G20160 LOC100798912 LOC100527424 LOC100305817 LOC101244799 LOC101267649 LOC103839875 LOC103860007 LOC100252442 LOC100241010 LOC18104497 LOC7467445 LOC25479574 LOC11441647 LOC107901289 LOC107962625 LOC107909217 LOC106381595 LOC106381583 LOC102583911 LOC102588744 LOC102625613 LOC107829442 LOC107801239 LOC107788355 CHLRE_06g249250v5
Function* uncharacterized LOC103633413 uncharacterized LOC100282785 NHP2-like protein 1 NHP2-like protein 1 NHP2-like protein 1 uncharacterized LOC4332209 uncharacterized LOC4348007 NHP2-like protein 1 NHP2-like protein 1 NHP2-like protein 1 NHP2-like protein 1 NHP2-like protein 1 NHP2-like protein 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein NHP2-like protein 1 uncharacterized LOC100527424 uncharacterized LOC100305817 uncharacterized LOC101244799 uncharacterized LOC101267649 NHP2-like protein 1 NHP2-like protein 1 uncharacterized LOC100252442 uncharacterized LOC100241010 uncharacterized LOC18104497 uncharacterized LOC7467445 NHP2-like protein 1 NHP2-like protein 1 NHP2-like protein 1 NHP2-like protein 1 NHP2-like protein 1 NHP2-like protein 1 NHP2-like protein 1 NHP2-like protein 1 NHP2-like protein 1 13 kDa ribonucleoprotein-associated protein uncharacterized LOC107829442 uncharacterized LOC107801239 uncharacterized LOC107788355 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 18
zma03008 Ribosome biogenesis in eukaryotes 2
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 13
zma03008 Ribosome biogenesis in eukaryotes 3
zma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 15
sbi04120 Ubiquitin mediated proteolysis 3
sbi03008 Ribosome biogenesis in eukaryotes 2
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 12
sbi04120 Ubiquitin mediated proteolysis 3
sbi03008 Ribosome biogenesis in eukaryotes 2
sbi03040 Spliceosome 2
sbi00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 16
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 4
tae03008 Ribosome biogenesis in eukaryotes 4
tae03040 Spliceosome 3
tae03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 6
tae03008 Ribosome biogenesis in eukaryotes 3
tae03040 Spliceosome 3
tae03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 6
tae03008 Ribosome biogenesis in eukaryotes 3
tae03040 Spliceosome 3
tae03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 6
hvu03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 8
bdi03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 7
ath03010 Ribosome 4
ath03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 5
ath03010 Ribosome 3
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 10
gma03008 Ribosome biogenesis in eukaryotes 3
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 14
gma03008 Ribosome biogenesis in eukaryotes 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 14
gma03008 Ribosome biogenesis in eukaryotes 3
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 8
sly03010 Ribosome 2
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 8
sly03010 Ribosome 5
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 11
bra03040 Spliceosome 3
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 10
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 9
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 14
vvi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 16
ppo03008 Ribosome biogenesis in eukaryotes 3
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 9
ppo03008 Ribosome biogenesis in eukaryotes 3
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 15
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
ghi03040 Spliceosome 4
ghi03010 Ribosome 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
ghi03040 Spliceosome 4
ghi03010 Ribosome 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
ghi03040 Spliceosome 4
ghi03010 Ribosome 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 10
bna03008 Ribosome biogenesis in eukaryotes 8
bna03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 12
bna03040 Spliceosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 4
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 4
sot03010 Ribosome 2
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 3
cit03083 Polycomb repressive complex 2
cit04120 Ubiquitin mediated proteolysis 2
cit04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 5
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 5
nta03008 Ribosome biogenesis in eukaryotes 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 5
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 19
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103633413 100282785 100303837 8078864 8085664 4332209 4348007 123085205 123092812 123098104 123449187 100824839 100844088 828333 832138 100798912 100527424 100305817 101244799 101267649 103839875 103860007 100252442 100241010 18104497 7467445 25479574 11441647 107901289 107962625 107909217 106381595 106381583 102583911 102588744 102625613 107829442 107801239 107788355 66053519
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