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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_14g608970v5   uncharacterized protein 
 ath-u.5   AT3G13882   Ribosomal protein L34 
 gma-u.5   100809386   uncharacterized LOC100809386 
 gma-u.5   100305667   uncharacterized LOC100305667 
 sly-u.5   101254397   uncharacterized LOC101254397 
 osa-u.5   4326350   uncharacterized LOC4326350 
 zma-u.5   100272242   LIN1 protein 
 zma-u.5   100284012   LIN1 protein 
 vvi-u.5   100265274   uncharacterized LOC100265274 
 ppo-u.5   7483520   uncharacterized LOC7483520 
 mtr-u.5   25500484   uncharacterized LOC25500484 

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Top 50 coexpressed genes to CHLRE_14g608970v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_14g608970v5 (cre-r.1 coexpression data)

CoexMap"66056140"


creCHLRE_14g608970v5 | Entrez gene ID : 66056140    
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 1 2 1 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006412 [list] [network] translation  (268 genes)  IEA  
GO CC
GO:0005762 [list] [network] mitochondrial large ribosomal subunit  (16 genes)  IEA  
GO:0005840 [list] [network] ribosome  (168 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (164 genes)  IEA  
Protein XP_042916611.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  chlo 3  (predict for XP_042916611.1)
Subcellular
localization
TargetP
chlo 5  (predict for XP_042916611.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_14g608970v5

.
ath-u.5
for
AT3G13882

.
gma-u.5
for
100809386

.
gma-u.5
for
100305667

.
sly-u.5
for
101254397

.
osa-u.5
for
4326350

.
zma-u.5
for
100272242

.
zma-u.5
for
100284012

.
vvi-u.5
for
100265274

.
ppo-u.5
for
7483520

.
mtr-u.5
for
25500484

.


Ortholog ID: 7104
Species ath gma gma sly osa zma zma bra bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre cre sbi sot cit bdi nta nta
Symbol AT3G13882 LOC100305667 LOC100809386 LOC101254397 LOC4326350 LOC100284012 LOC100272242 LOC103859542 LOC103859546 LOC100265274 LOC7483520 LOC25500484 LOC123069961 LOC123078421 LOC123443741 LOC107933607 LOC107937246 LOC111209312 LOC111215727 CHLRE_14g608970v5 CHLRE_14g609050v5 LOC8078206 LOC102589256 LOC102624161 LOC100840312 LOC107825667 LOC107796706
Function* Ribosomal protein L34 uncharacterized LOC100305667 uncharacterized LOC100809386 uncharacterized LOC101254397 uncharacterized LOC4326350 LIN1 protein LIN1 protein uncharacterized LOC103859542 uncharacterized LOC103859546 uncharacterized LOC100265274 uncharacterized LOC7483520 uncharacterized LOC25500484 uncharacterized LOC123069961 uncharacterized LOC123078421 uncharacterized LOC123443741 uncharacterized LOC107933607 uncharacterized LOC107937246 uncharacterized LOC111209312 uncharacterized LOC111215727 uncharacterized protein uncharacterized protein uncharacterized LOC8078206 uncharacterized LOC102589256 uncharacterized LOC102624161 uncharacterized LOC100840312 uncharacterized LOC107825667 uncharacterized LOC107796706
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00250 Alanine, aspartate and glutamate metabolism 2
gma00260 Glycine, serine and threonine metabolism 2
gma00270 Cysteine and methionine metabolism 2
gma00280 Valine, leucine and isoleucine degradation 2
gma00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 10
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 14
bra03040 Spliceosome 3
bra03013 Nucleocytoplasmic transport 2
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 4
vvi03008 Ribosome biogenesis in eukaryotes 3
vvi00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 20
mtr04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 6
tae03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 4
tae03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 2
hvu01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
ghi03040 Spliceosome 4
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
ghi03040 Spliceosome 4
ghi03010 Ribosome 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 7
bdi03040 Spliceosome 3
bdi03050 Proteasome 2
bdi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 15
nta00905 Brassinosteroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 15
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 3768810 100305667 100809386 101254397 4326350 100284012 100272242 103859542 103859546 100265274 7483520 25500484 123069961 123078421 123443741 107933607 107937246 111209312 111215727 66056140 66056142 8078206 102589256 102624161 100840312 107825667 107796706
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