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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   FAD2-3   microsomal oleate desaturase FAD2-3 
 gma-r.7   FAD2-3   microsomal oleate desaturase FAD2-3 
 gma-m.5   FAD2-3   microsomal oleate desaturase FAD2-3 
 gma-u.5   FAD2-1B   omega-6 fatty acid desaturase 
 gma-u.5   FAD2-2D   fatty acid desaturase-2 
 gma-u.5   FAD2-2B   fatty acid desaturase-2 
 mtr-u.5   25483518   delta(12)-fatty-acid desaturase FAD2 
 mtr-u.5   11444765   omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 2 
 ppo-u.5   7479530   delta(12)-fatty-acid desaturase FAD2 
 ath-u.5   FAD2   fatty acid desaturase 2 
 vvi-u.5   100252129   delta(12)-fatty-acid desaturase FAD2 
 vvi-u.5   100258789   omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 2-like 
 sly-u.5   101250481   delta(12)-fatty-acid desaturase 
 sly-u.5   SlFAD2-7   delta(12)-fatty-acid desaturase 
 sly-u.5   101259966   delta(12)-fatty-acid desaturase 
 osa-u.5   4330523   fatty acid desaturase DES2 
 osa-u.5   4343026   fatty acid desaturase DES2 
 osa-u.5   4343027   fatty acid desaturase DES2 
 zma-u.5   100381639   Delta(12)-fatty-acid desaturase 
 zma-u.5   100282744   omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 2 
 zma-u.5   100273207   Delta(12)-fatty-acid desaturase 

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Top 50 coexpressed genes to FAD2-3 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to FAD2-3 (gma-u.5 coexpression data)

CoexMap"732617"


gmaFAD2-3 | Entrez gene ID : 732617      
Species gma mtr ppo ath vvi sly osa zma hvu sot tae nta bra cit ghi bna bdi sbi cre
Paralog 6 2 1 1 2 3 3 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx01040 [list] [network] Biosynthesis of unsaturated fatty acids (39 genes)
gmx01212 [list] [network] Fatty acid metabolism (121 genes)
GO BP
GO:0006629 [list] [network] lipid metabolic process  (1302 genes)  IEA  
GO CC
GO MF
GO:0045485 [list] [network] omega-6 fatty acid desaturase activity  (9 genes)  IEA  
GO:0016717 [list] [network] oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water  (29 genes)  IEA  
Protein NP_001237865.1 [sequence] [blastp]
Subcellular
localization
wolf
E.R. 6,  plas 3,  cyto_plas 2  (predict for NP_001237865.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001237865.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
FAD2-3

.
gma-r.7
for
FAD2-3

.
gma-m.5
for
FAD2-3

.
gma-u.5
for
FAD2-1B

.
gma-u.5
for
FAD2-2D

.
gma-u.5
for
FAD2-2B

.
mtr-u.5
for
25483518

.
mtr-u.5
for
11444765

.
ppo-u.5
for
7479530

.
ath-u.5
for
FAD2

.
vvi-u.5
for
100252129

.
vvi-u.5
for
100258789

.
sly-u.5
for
101250481

.
sly-u.5
for
SlFAD2-7

.
sly-u.5
for
101259966

.
osa-u.5
for
4330523

.
osa-u.5
for
4343026

.
osa-u.5
for
4343027

.
zma-u.5
for
100381639

.
zma-u.5
for
100282744

.
zma-u.5
for
100273207

.


Ortholog ID: 1460
Species ath gma gma sly sly osa osa zma zma bra vvi vvi ppo mtr tae hvu ghi ghi bna bna cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol FAD2 FAD2-2D FAD2-1B SlFAD2-7 cevi19 LOC4330523 LOC4343026 LOC100273207 LOC118475586 LOC103870276 LOC100252129 LOC100258789 LOC7483979 LOC11444765 LOC123145289 LOC123405501 LOC107921152 LOC107941903 LOC106452523 LOC106417584 CHLRE_17g711150v5 LOC8066368 LOC110435045 LOC102600240 LOC102579518 LOC102627239 LOC102611163 LOC100835723 LOC100837786 LOC107831844 LOC107829678
Function* fatty acid desaturase 2 fatty acid desaturase-2 omega-6 fatty acid desaturase delta(12)-fatty-acid desaturase delta(12)-fatty-acid desaturase fatty acid desaturase DES2 fatty acid desaturase DES2 Delta(12)-fatty-acid desaturase fatty acid desaturase DES2-like omega-6 fatty acid desaturase, endoplasmic reticulum delta(12)-fatty-acid desaturase FAD2 omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 2-like delta(12)-fatty-acid desaturase FAD2 omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 2 fatty acid desaturase DES2-like fatty acid desaturase DES2 delta(12)-fatty-acid desaturase FAD2-like delta(12)-fatty-acid desaturase FAD2 omega-6 fatty acid desaturase, endoplasmic reticulum omega-6 fatty acid desaturase, endoplasmic reticulum-like uncharacterized protein fatty acid desaturase DES2 fatty acid desaturase DES2 delta(12) oleic acid desaturase FAD2-like delta(12) oleic acid desaturase FAD2-like delta(12)-fatty-acid desaturase FAD2 delta(12)-fatty-acid desaturase FAD2 fatty acid desaturase DES2 fatty acid desaturase DES2 delta(12)-acyl-lipid-desaturase delta(12)-fatty-acid desaturase FAD2-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 2
ath03083 Polycomb repressive complex 2
ath04120 Ubiquitin mediated proteolysis 2
ath04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00910 Nitrogen metabolism 4
gma01310 Nitrogen cycle 4
gma00010 Glycolysis / Gluconeogenesis 2
gma00030 Pentose phosphate pathway 2
gma00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01040 Biosynthesis of unsaturated fatty acids 2
gma01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01040 Biosynthesis of unsaturated fatty acids 4
sly01212 Fatty acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01040 Biosynthesis of unsaturated fatty acids 4
sly01212 Fatty acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00900 Terpenoid backbone biosynthesis 3
osa01040 Biosynthesis of unsaturated fatty acids 2
osa01212 Fatty acid metabolism 2
osa00230 Purine metabolism 2
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00904 Diterpenoid biosynthesis 10
osa01040 Biosynthesis of unsaturated fatty acids 2
osa01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00909 Sesquiterpenoid and triterpenoid biosynthesis 3
zma01040 Biosynthesis of unsaturated fatty acids 2
zma01212 Fatty acid metabolism 2
zma00280 Valine, leucine and isoleucine degradation 2
zma00410 beta-Alanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01212 Fatty acid metabolism 5
zma01040 Biosynthesis of unsaturated fatty acids 4
zma00280 Valine, leucine and isoleucine degradation 2
zma00650 Butanoate metabolism 2
zma00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 4
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01040 Biosynthesis of unsaturated fatty acids 2
vvi01212 Fatty acid metabolism 2
vvi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00900 Terpenoid backbone biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01040 Biosynthesis of unsaturated fatty acids 6
tae01212 Fatty acid metabolism 6
tae00592 alpha-Linolenic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01040 Biosynthesis of unsaturated fatty acids 4
ghi01212 Fatty acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01040 Biosynthesis of unsaturated fatty acids 4
ghi01212 Fatty acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01040 Biosynthesis of unsaturated fatty acids 3
bna01212 Fatty acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01040 Biosynthesis of unsaturated fatty acids 3
bna01212 Fatty acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00360 Phenylalanine metabolism 8
sbi00940 Phenylpropanoid biosynthesis 8
sbi01230 Biosynthesis of amino acids 3
sbi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
sbi01040 Biosynthesis of unsaturated fatty acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00710 Carbon fixation by Calvin cycle 5
sbi01200 Carbon metabolism 5
sbi00030 Pentose phosphate pathway 4
sbi01230 Biosynthesis of amino acids 4
sbi00360 Phenylalanine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01212 Fatty acid metabolism 13
sot01040 Biosynthesis of unsaturated fatty acids 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01040 Biosynthesis of unsaturated fatty acids 9
sot01212 Fatty acid metabolism 9
sot00480 Glutathione metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00940 Phenylpropanoid biosynthesis 7
cit00360 Phenylalanine metabolism 3
cit00941 Flavonoid biosynthesis 3
cit00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 3
cit00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00860 Porphyrin metabolism 4
bdi01040 Biosynthesis of unsaturated fatty acids 2
bdi01212 Fatty acid metabolism 2
bdi00196 Photosynthesis - antenna proteins 2
bdi00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00944 Flavone and flavonol biosynthesis 2
bdi01040 Biosynthesis of unsaturated fatty acids 2
bdi01212 Fatty acid metabolism 2
bdi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 4
nta00360 Phenylalanine metabolism 3
nta01040 Biosynthesis of unsaturated fatty acids 2
nta01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04814 Motor proteins 4
nta00541 Biosynthesis of various nucleotide sugars 3
nta01040 Biosynthesis of unsaturated fatty acids 2
nta01212 Fatty acid metabolism 2
nta01250 Biosynthesis of nucleotide sugars 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 820387 100780912 100805777 101255474 544107 4330523 4343026 100273207 118475586 103870276 100252129 100258789 7483979 11444765 123145289 123405501 107921152 107941903 106452523 106417584 5717125 8066368 110435045 102600240 102579518 102627239 102611163 100835723 100837786 107831844 107829678
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