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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   732779   pentatricopeptide repeat protein 
 zma-r.6   732779   pentatricopeptide repeat protein 
 osa-u.5   4337454   pentatricopeptide repeat-containing protein At5g04810, chloroplastic 
 ath-u.5   AT5G04810   pentatricopeptide (PPR) repeat-containing protein 
 gma-u.5   100784052   pentatricopeptide repeat-containing protein At5g04810, chloroplastic 
 gma-u.5   100775408   pentatricopeptide repeat-containing protein At5g04810, chloroplastic 
 sly-u.5   101253991   pentatricopeptide repeat-containing protein At5g04810, chloroplastic-like 
 sly-u.5   101244922   pentatricopeptide repeat-containing protein 
 vvi-u.5   100261662   pentatricopeptide repeat-containing protein At5g04810, chloroplastic 
 ppo-u.5   7491612   pentatricopeptide repeat-containing protein At5g04810, chloroplastic 
 ppo-u.5   7486889   pentatricopeptide repeat-containing protein At5g04810, chloroplastic 
 mtr-u.5   25483157   pentatricopeptide repeat-containing protein At5g04810, chloroplastic 

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Top 50 coexpressed genes to 732779 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 732779 (zma-u.5 coexpression data)

CoexMap"732779"


zmaLOC732779 | Entrez gene ID : 732779      
Species zma osa ath gma sly vvi ppo mtr sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 2 1 1 2 2 1 2 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1549 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4389 genes)  IEA  
Protein NP_001105869.1 [sequence] [blastp]
XP_020400845.1 [sequence] [blastp]
XP_020400846.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 2  (predict for NP_001105869.1)
chlo 8,  mito 2  (predict for XP_020400845.1)
chlo 8,  mito 2  (predict for XP_020400846.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_001105869.1)
chlo 9  (predict for XP_020400845.1)
chlo 9  (predict for XP_020400846.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
732779

.
zma-r.6
for
732779

.
osa-u.5
for
4337454

.
ath-u.5
for
AT5G04810

.
gma-u.5
for
100784052

.
gma-u.5
for
100775408

.
sly-u.5
for
101253991

.
sly-u.5
for
101244922

.
vvi-u.5
for
100261662

.
ppo-u.5
for
7491612

.
ppo-u.5
for
7486889

.
mtr-u.5
for
25483157

.


Ortholog ID: 9072
Species ath gma gma sly sly osa zma bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol AT5G04810 LOC100784052 LOC100775408 LOC101253991 LOC101244922 LOC4337454 LOC732779 LOC103847264 LOC100261662 LOC7491612 LOC7486889 LOC25483157 LOC123047494 LOC123191114 LOC123428478 LOC107933301 LOC107920250 LOC106433115 LOC125579104 LOC8076492 LOC102584933 LOC102628266 LOC100831808 LOC107777116 LOC107775157
Function* pentatricopeptide (PPR) repeat-containing protein pentatricopeptide repeat-containing protein At5g04810, chloroplastic pentatricopeptide repeat-containing protein At5g04810, chloroplastic pentatricopeptide repeat-containing protein At5g04810, chloroplastic-like pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At5g04810, chloroplastic pentatricopeptide repeat protein pentatricopeptide repeat-containing protein At5g04810, chloroplastic pentatricopeptide repeat-containing protein At5g04810, chloroplastic pentatricopeptide repeat-containing protein At5g04810, chloroplastic pentatricopeptide repeat-containing protein At5g04810, chloroplastic pentatricopeptide repeat-containing protein At5g04810, chloroplastic pentatricopeptide repeat-containing protein At5g04810, chloroplastic pentatricopeptide repeat-containing protein At5g04810, chloroplastic pentatricopeptide repeat-containing protein At5g04810, chloroplastic pentatricopeptide repeat-containing protein At5g04810, chloroplastic pentatricopeptide repeat-containing protein At5g04810, chloroplastic pentatricopeptide repeat-containing protein At5g04810, chloroplastic pentatricopeptide repeat-containing protein At5g04810, chloroplastic-like pentatricopeptide repeat-containing protein At5g04810, chloroplastic pentatricopeptide repeat-containing protein At5g04810, chloroplastic-like pentatricopeptide repeat-containing protein At5g04810, chloroplastic pentatricopeptide repeat-containing protein At5g04810, chloroplastic uncharacterized LOC107777116 uncharacterized LOC107775157
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00970 Aminoacyl-tRNA biosynthesis 3
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00480 Glutathione metabolism 2
mtr00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00906 Carotenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04626 Plant-pathogen interaction 2
nta02010 ABC transporters 2
nta04981 Folate transport and metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 830360 100784052 100775408 101253991 101244922 4337454 732779 103847264 100261662 7491612 7486889 25483157 123047494 123191114 123428478 107933301 107920250 106433115 125579104 8076492 102584933 102628266 100831808 107777116 107775157
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