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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7486889   pentatricopeptide repeat-containing protein At5g04810, chloroplastic 
 ppo-r.4   7486889   pentatricopeptide repeat-containing protein At5g04810, chloroplastic 
 ppo-u.5   7491612   pentatricopeptide repeat-containing protein At5g04810, chloroplastic 
 gma-u.5   100784052   pentatricopeptide repeat-containing protein At5g04810, chloroplastic 
 gma-u.5   100775408   pentatricopeptide repeat-containing protein At5g04810, chloroplastic 
 mtr-u.5   25483157   pentatricopeptide repeat-containing protein At5g04810, chloroplastic 
 ath-u.5   AT5G04810   pentatricopeptide (PPR) repeat-containing protein 
 bra-r.6   103847264   pentatricopeptide repeat-containing protein At5g04810, chloroplastic 
 vvi-u.5   100261662   pentatricopeptide repeat-containing protein At5g04810, chloroplastic 
 ghi-r.1   107933301   pentatricopeptide repeat-containing protein At5g04810, chloroplastic 
 ghi-r.1   107920250   pentatricopeptide repeat-containing protein At5g04810, chloroplastic 
 bna-r.1   106433115   pentatricopeptide repeat-containing protein At5g04810, chloroplastic 
 bna-r.1   125579104   pentatricopeptide repeat-containing protein At5g04810, chloroplastic-like 
 cit-r.1   102628266   pentatricopeptide repeat-containing protein At5g04810, chloroplastic 
 sly-u.5   101253991   pentatricopeptide repeat-containing protein At5g04810, chloroplastic-like 
 sly-u.5   101244922   pentatricopeptide repeat-containing protein 
 sot-r.1   102584933   pentatricopeptide repeat-containing protein At5g04810, chloroplastic-like 
 nta-r.1   107777116   uncharacterized LOC107777116 
 nta-r.1   107775157   uncharacterized LOC107775157 
 osa-u.5   4337454   pentatricopeptide repeat-containing protein At5g04810, chloroplastic 
 zma-u.5   732779   pentatricopeptide repeat protein 
 tae-r.2   123047494   pentatricopeptide repeat-containing protein At5g04810, chloroplastic 
 tae-r.2   123055287   pentatricopeptide repeat-containing protein At5g04810, chloroplastic 
 tae-r.2   123056060   pentatricopeptide repeat-containing protein At5g04810, chloroplastic 
 hvu-r.1   123428478   pentatricopeptide repeat-containing protein At5g04810, chloroplastic 
 sbi-r.1   8076492   pentatricopeptide repeat-containing protein At5g04810, chloroplastic 
 bdi-r.1   100831808   pentatricopeptide repeat-containing protein At5g04810, chloroplastic 

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Top 50 coexpressed genes to 7486889 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7486889 (ppo-u.5 coexpression data)

CoexMap""


ppoLOC7486889 | Entrez gene ID : 7486889    
Species ppo gma mtr ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 2 1 1 1 1 2 2 1 2 1 2 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
Function pentatricopeptide repeat-containing protein At5g04810, chloroplastic
KEGG
GO BP
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1480 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_024462613.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 2  (predict for XP_024462613.2)
Subcellular
localization
TargetP
chlo 7,  other 4  (predict for XP_024462613.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7486889
ppo-r.4
for
7486889
ppo-u.5
for
7491612
gma-u.5
for
100784052
gma-u.5
for
100775408
mtr-u.5
for
25483157
ath-u.5
for
AT5G04810
bra-r.6
for
103847264
vvi-u.5
for
100261662
ghi-r.1
for
107933301
ghi-r.1
for
107920250
bna-r.1
for
106433115
bna-r.1
for
125579104
cit-r.1
for
102628266
sly-u.5
for
101253991
sly-u.5
for
101244922
sot-r.1
for
102584933
nta-r.1
for
107777116
nta-r.1
for
107775157
osa-u.5
for
4337454
zma-u.5
for
732779
tae-r.2
for
123047494
tae-r.2
for
123055287
tae-r.2
for
123056060
hvu-r.1
for
123428478
sbi-r.1
for
8076492
bdi-r.1
for
100831808

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Ortholog ID: 9072
Species ppo ppo gma gma mtr ath bra vvi ghi ghi bna bna cit sly sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC7486889 LOC7491612 LOC100784052 LOC100775408 LOC25483157 AT5G04810 LOC103847264 LOC100261662 LOC107933301 LOC107920250 LOC106433115 LOC125579104 LOC102628266 LOC101253991 LOC101244922 LOC102584933 LOC107777116 LOC107775157 LOC4337454 LOC732779 LOC123047494 LOC123055287 LOC123191114 LOC123428478 LOC8076492 LOC100831808
Function* pentatricopeptide repeat-containing protein At5g04810, chloroplastic pentatricopeptide repeat-containing protein At5g04810, chloroplastic pentatricopeptide repeat-containing protein At5g04810, chloroplastic pentatricopeptide repeat-containing protein At5g04810, chloroplastic pentatricopeptide repeat-containing protein At5g04810, chloroplastic pentatricopeptide (PPR) repeat-containing protein pentatricopeptide repeat-containing protein At5g04810, chloroplastic pentatricopeptide repeat-containing protein At5g04810, chloroplastic pentatricopeptide repeat-containing protein At5g04810, chloroplastic pentatricopeptide repeat-containing protein At5g04810, chloroplastic pentatricopeptide repeat-containing protein At5g04810, chloroplastic pentatricopeptide repeat-containing protein At5g04810, chloroplastic-like pentatricopeptide repeat-containing protein At5g04810, chloroplastic pentatricopeptide repeat-containing protein At5g04810, chloroplastic-like pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At5g04810, chloroplastic-like uncharacterized LOC107777116 uncharacterized LOC107775157 pentatricopeptide repeat-containing protein At5g04810, chloroplastic pentatricopeptide repeat protein pentatricopeptide repeat-containing protein At5g04810, chloroplastic pentatricopeptide repeat-containing protein At5g04810, chloroplastic pentatricopeptide repeat-containing protein At5g04810, chloroplastic pentatricopeptide repeat-containing protein At5g04810, chloroplastic pentatricopeptide repeat-containing protein At5g04810, chloroplastic pentatricopeptide repeat-containing protein At5g04810, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00480 Glutathione metabolism 2
mtr00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00970 Aminoacyl-tRNA biosynthesis 3
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00906 Carotenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04626 Plant-pathogen interaction 2
nta02010 ABC transporters 2
nta04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00970 Aminoacyl-tRNA biosynthesis 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 7486889 7491612 100784052 100775408 25483157 830360 103847264 100261662 107933301 107920250 106433115 125579104 102628266 101253991 101244922 102584933 107777116 107775157 4337454 732779 123047494 123055287 123191114 123428478 8076492 100831808
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