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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7456227   30S ribosomal protein S21, chloroplastic 
 ppo-r.4   7456227   30S ribosomal protein S21, chloroplastic 
 ppo-m.4   7456227   30S ribosomal protein S21, chloroplastic 
 gma-u.5   100790222   30S ribosomal protein S21, chloroplastic 
 gma-u.5   100812464   30S ribosomal protein S21, chloroplastic 
 gma-u.5   100780245   30S ribosomal protein S21, chloroplastic 
 mtr-u.5   11405582   30S ribosomal protein S21, chloroplastic 
 mtr-u.5   25497841   30S ribosomal protein S21, chloroplastic 
 ath-u.5   GHS1   Ribosomal protein S21 family protein 
 vvi-u.5   100241260   small ribosomal subunit protein bS21c 
 sly-u.5   101245346   small ribosomal subunit protein bS21c 
 sly-u.5   101248838   small ribosomal subunit protein bS21c 
 osa-u.5   4328558   small ribosomal subunit protein bS21c 
 zma-u.5   100285469   30S ribosomal protein S21, chloroplastic-like 
 zma-u.5   100284221   30S ribosomal protein S21, chloroplastic-like 

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Top 50 coexpressed genes to 7456227 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7456227 (ppo-u.5 coexpression data)

CoexMap"7456227"


ppoLOC7456227 | Entrez gene ID : 7456227    
Species ppo gma mtr ath vvi sly osa zma hvu sot tae nta bra cit ghi bna bdi sbi cre
Paralog 3 3 2 1 1 2 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006412 [list] [network] translation  (598 genes)  IEA  
GO CC
GO:0005840 [list] [network] ribosome  (453 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (439 genes)  IEA  
Protein XP_002300102.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  chlo 2  (predict for XP_002300102.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_002300102.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7456227

.
ppo-r.4
for
7456227

.
ppo-m.4
for
7456227

.
gma-u.5
for
100790222

.
gma-u.5
for
100812464

.
gma-u.5
for
100780245

.
mtr-u.5
for
11405582

.
mtr-u.5
for
25497841

.
ath-u.5
for
GHS1

.
vvi-u.5
for
100241260

.
sly-u.5
for
101245346

.
sly-u.5
for
101248838

.
osa-u.5
for
4328558

.
zma-u.5
for
100285469

.
zma-u.5
for
100284221

.


Ortholog ID: 3585
Species ath gma gma sly sly osa zma zma bra bra vvi ppo mtr mtr tae tae hvu ghi ghi bna cre sbi sot sot cit cit bdi nta nta
Symbol GHS1 LOC102661132 LOC100777605 LOC101248838 LOC101245346 LOC4328558 LOC100285469 LOC100284221 LOC103836981 LOC103854264 LOC100241260 LOC7456227 LOC11405582 LOC25497841 LOC123136814 LOC123144299 LOC123403808 LOC121219331 LOC107899715 BNAA02G28660D CHLRE_01g017300v5 LOC8079435 LOC102602305 LOC102594896 LOC102628693 LOC102620819 LOC100828601 LOC107822371 LOC107761075
Function* Ribosomal protein S21 family protein 30S ribosomal protein S21, chloroplastic 30S ribosomal protein S21, chloroplastic small ribosomal subunit protein bS21c small ribosomal subunit protein bS21c small ribosomal subunit protein bS21c 30S ribosomal protein S21, chloroplastic-like 30S ribosomal protein S21, chloroplastic-like 30S ribosomal protein S21, chloroplastic 30S ribosomal protein S21, chloroplastic small ribosomal subunit protein bS21c 30S ribosomal protein S21, chloroplastic 30S ribosomal protein S21, chloroplastic 30S ribosomal protein S21, chloroplastic 30S ribosomal protein S21, chloroplastic 30S ribosomal protein S21, chloroplastic 30S ribosomal protein S21, chloroplastic-like 30S ribosomal protein S21, chloroplastic 30S ribosomal protein S21, chloroplastic 30S ribosomal protein S21, chloroplastic uncharacterized protein 30S ribosomal protein S21, chloroplastic uncharacterized LOC102602305 uncharacterized LOC102594896 30S ribosomal protein S21, chloroplastic 30S ribosomal protein S21, chloroplastic 30S ribosomal protein S21, chloroplastic small ribosomal subunit protein bS21c-like small ribosomal subunit protein bS21c-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 2
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 10
bra00860 Porphyrin metabolism 4
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
mtr03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 4
ghi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 11
cre00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
cre01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00010 Glycolysis / Gluconeogenesis 5
cit01230 Biosynthesis of amino acids 5
cit01200 Carbon metabolism 4
cit00710 Carbon fixation by Calvin cycle 3
cit00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 5
nta00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 10
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 822335 102661132 100777605 101248838 101245346 4328558 100285469 100284221 103836981 103854264 100241260 7456227 11405582 25497841 123136814 123144299 123403808 121219331 107899715 106402093 5715142 8079435 102602305 102594896 102628693 102620819 100828601 107822371 107761075
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