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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-m.4   7457128   nuclear transcription factor Y subunit B-3 
 ppo-u.5   7486332   nuclear transcription factor Y subunit B-3 
 gma-u.5   100797721   nuclear transcription factor Y subunit B-10 
 gma-u.5   100810059   nuclear transcription factor Y subunit B-2 
 mtr-u.5   11436173   nuclear transcription factor Y subunit B-3 
 sly-u.5   104646961   nuclear transcription factor Y subunit B-1-like 

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Top 50 coexpressed genes to 7457128 (ppo-m.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7457128 (ppo-m.4 coexpression data)

CoexMap"7457128"


ppoLOC7457128 | Entrez gene ID : 7457128    
Species ppo gma mtr sly tae osa hvu zma ghi bdi cit vvi ath bra cre sbi bna nta sot
Paralog 2 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (481 genes)  IEA  
GO CC
GO:0016602 [list] [network] CCAAT-binding factor complex  (26 genes)  IEA  
GO:0005634 [list] [network] nucleus  (3662 genes)  IEA  
GO MF
GO:0001228 [list] [network] DNA-binding transcription activator activity, RNA polymerase II-specific  (27 genes)  IEA  
GO:0046982 [list] [network] protein heterodimerization activity  (111 genes)  IEA  
GO:0000978 [list] [network] RNA polymerase II cis-regulatory region sequence-specific DNA binding  (266 genes)  IEA  
Protein XP_024461102.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto_nucl 3,  chlo 1,  vacu 1,  pero 1  (predict for XP_024461102.1)
Subcellular
localization
TargetP
chlo 7  (predict for XP_024461102.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-m.4
for
7457128

.
ppo-u.5
for
7486332

.
gma-u.5
for
100797721

.
gma-u.5
for
100810059

.
mtr-u.5
for
11436173

.
sly-u.5
for
104646961

.


Ortholog ID: 14217
Species gma gma sly ppo mtr ghi ghi sot cit nta nta
Symbol LOC100797721 LOC100810059 LOC104646961 LOC7486332 LOC11436173 LOC107950379 LOC107951661 LOC102588708 LOC102607711 LOC107761852 LOC107810290
Function* nuclear transcription factor Y subunit B-10 nuclear transcription factor Y subunit B-2 nuclear transcription factor Y subunit B-1-like nuclear transcription factor Y subunit B-3 nuclear transcription factor Y subunit B-3 nuclear transcription factor Y subunit B-3 nuclear transcription factor Y subunit B nuclear transcription factor Y subunit B-3-like nuclear transcription factor Y subunit B-3-like nuclear transcription factor Y subunit B-1-like nuclear transcription factor Y subunit B-1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04626 Plant-pathogen interaction 2
gma03083 Polycomb repressive complex 2
gma04120 Ubiquitin mediated proteolysis 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04626 Plant-pathogen interaction 2
gma03083 Polycomb repressive complex 2
gma04120 Ubiquitin mediated proteolysis 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 6
sly04016 MAPK signaling pathway - plant 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100797721 100810059 104646961 7486332 11436173 107950379 107951661 102588708 102607711 107761852 107810290
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