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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7459104   protein SEEDLING PLASTID DEVELOPMENT 1 
 ppo-r.4   7459104   protein SEEDLING PLASTID DEVELOPMENT 1 
 ppo-u.5   7468442   protein SEEDLING PLASTID DEVELOPMENT 1 
 gma-u.5   100786624   protein SEEDLING PLASTID DEVELOPMENT 1 
 gma-u.5   100807394   protein SEEDLING PLASTID DEVELOPMENT 1 
 gma-u.5   100810052   protein SEEDLING PLASTID DEVELOPMENT 1 
 mtr-u.5   25485535   protein SEEDLING PLASTID DEVELOPMENT 1 
 mtr-u.5   25484494   uncharacterized protein ycf45 
 mtr-u.5   25502519   protein SEEDLING PLASTID DEVELOPMENT 1 
 ath-u.5   SPD1   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 ath-u.5   AT1G33290   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 ath-u.5   AT1G73170   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 vvi-u.5   100254713   protein SEEDLING PLASTID DEVELOPMENT 1 
 vvi-u.5   100243620   protein SEEDLING PLASTID DEVELOPMENT 1 
 vvi-u.5   100256808   hypothetical protein 
 sly-u.5   101252870   uncharacterized protein ycf45 
 sly-u.5   101257931   protein SEEDLING PLASTID DEVELOPMENT 1 
 sly-u.5   101265790   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 osa-u.5   4351767   uncharacterized protein ycf45 
 osa-u.5   4342600   protein SEEDLING PLASTID DEVELOPMENT 1 
 osa-u.5   4340177   protein SEEDLING PLASTID DEVELOPMENT 1 
 zma-u.5   100501605   uncharacterized LOC100501605 
 zma-u.5   100277737   uncharacterized LOC100277737 
 zma-u.5   100274315   P-loop containing nucleoside triphosphate hydrolase superfamily protein 

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Top 50 coexpressed genes to 7459104 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7459104 (ppo-u.5 coexpression data)

CoexMap"7459104"


ppoLOC7459104 | Entrez gene ID : 7459104    
Species ppo gma mtr ath vvi sly osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 3 3 3 3 3 3 3 3 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0016887 [list] [network] ATP hydrolysis activity  (550 genes)  IEA  
Protein XP_002298905.3 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  cyto 4  (predict for XP_002298905.3)
Subcellular
localization
TargetP
chlo 5  (predict for XP_002298905.3)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7459104

.
ppo-r.4
for
7459104

.
ppo-u.5
for
7468442

.
gma-u.5
for
100786624

.
gma-u.5
for
100807394

.
gma-u.5
for
100810052

.
mtr-u.5
for
25485535

.
mtr-u.5
for
25484494

.
mtr-u.5
for
25502519

.
ath-u.5
for
SPD1

.
ath-u.5
for
AT1G33290

.
ath-u.5
for
AT1G73170

.
vvi-u.5
for
100254713

.
vvi-u.5
for
100243620

.
vvi-u.5
for
100256808

.
sly-u.5
for
101252870

.
sly-u.5
for
101257931

.
sly-u.5
for
101265790

.
osa-u.5
for
4351767

.
osa-u.5
for
4342600

.
osa-u.5
for
4340177

.
zma-u.5
for
100501605

.
zma-u.5
for
100277737

.
zma-u.5
for
100274315

.


Ortholog ID: 1855
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol AT1G33290 AT1G73170 LOC100810052 LOC100786624 LOC101252870 LOC101265790 LOC4351767 LOC4342600 LOC100501605 LOC100274315 LOC103870466 LOC103852828 LOC100256808 LOC100243620 LOC7459104 LOC7468442 LOC25502519 LOC25484494 LOC123189277 LOC123119955 LOC123410009 LOC123410861 LOC107915796 LOC107916820 LOC106399503 LOC106421076 CHLRE_17g716050v5 CHLRE_16g676850v5 LOC8075042 LOC8069170 LOC102578475 LOC102605144 LOC102618446 LOC102614364 LOC104581645 LOC100823606 LOC107819784 LOC107760479
Function* P-loop containing nucleoside triphosphate hydrolases superfamily protein P-loop containing nucleoside triphosphate hydrolases superfamily protein protein SEEDLING PLASTID DEVELOPMENT 1 protein SEEDLING PLASTID DEVELOPMENT 1 uncharacterized protein ycf45 P-loop containing nucleoside triphosphate hydrolases superfamily protein uncharacterized protein ycf45 protein SEEDLING PLASTID DEVELOPMENT 1 uncharacterized LOC100501605 P-loop containing nucleoside triphosphate hydrolase superfamily protein uncharacterized protein ycf45 uncharacterized protein ycf45 hypothetical protein protein SEEDLING PLASTID DEVELOPMENT 1 protein SEEDLING PLASTID DEVELOPMENT 1 protein SEEDLING PLASTID DEVELOPMENT 1 protein SEEDLING PLASTID DEVELOPMENT 1 uncharacterized protein ycf45 protein SEEDLING PLASTID DEVELOPMENT 1 uncharacterized protein ycf45 protein SEEDLING PLASTID DEVELOPMENT 1 protein SEEDLING PLASTID DEVELOPMENT 1 protein SEEDLING PLASTID DEVELOPMENT 1 protein SEEDLING PLASTID DEVELOPMENT 1 protein SEEDLING PLASTID DEVELOPMENT 1-like uncharacterized protein ycf45 uncharacterized protein uncharacterized protein uncharacterized protein ycf45 uncharacterized protein ycf45 uncharacterized protein ycf45 uncharacterized protein ycf45 protein SEEDLING PLASTID DEVELOPMENT 1 protein SEEDLING PLASTID DEVELOPMENT 1 uncharacterized LOC104581645 uncharacterized protein ycf45 protein SEEDLING PLASTID DEVELOPMENT 1 uncharacterized protein ycf45
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00561 Glycerolipid metabolism 4
ath00566 Sulfoquinovose metabolism 3
ath00053 Ascorbate and aldarate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01230 Biosynthesis of amino acids 2
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04146 Peroxisome 2
vvi00350 Tyrosine metabolism 2
vvi00410 beta-Alanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04626 Plant-pathogen interaction 3
ppo00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00561 Glycerolipid metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00010 Glycolysis / Gluconeogenesis 2
tae00710 Carbon fixation by Calvin cycle 2
tae01200 Carbon metabolism 2
tae01230 Biosynthesis of amino acids 2
tae00760 Nicotinate and nicotinamide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00860 Porphyrin metabolism 2
hvu00970 Aminoacyl-tRNA biosynthesis 2
hvu03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00030 Pentose phosphate pathway 2
ghi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01240 Biosynthesis of cofactors 4
ghi00500 Starch and sucrose metabolism 2
ghi00250 Alanine, aspartate and glutamate metabolism 2
ghi00760 Nicotinate and nicotinamide metabolism 2
ghi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04712 Circadian rhythm - plant 6
bna00920 Sulfur metabolism 4
bna00440 Phosphonate and phosphinate metabolism 2
bna00564 Glycerophospholipid metabolism 2
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00906 Carotenoid biosynthesis 3
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00561 Glycerolipid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00740 Riboflavin metabolism 2
nta01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 840224 843649 100810052 100786624 101252870 101265790 4351767 4342600 100501605 100274315 103870466 103852828 100256808 100243620 7459104 7468442 25502519 25484494 123189277 123119955 123410009 123410861 107915796 107916820 106399503 106421076 5725984 5721490 8075042 8069170 102578475 102605144 102618446 102614364 104581645 100823606 107819784 107760479
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