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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7461195   transcription termination factor MTEF1, chloroplastic 
 ppo-r.4   7461195   transcription termination factor MTEF1, chloroplastic 
 ppo-m.4   7461195   transcription termination factor MTEF1, chloroplastic 
 gma-u.5   100812333   transcription termination factor MTEF1, chloroplastic 
 mtr-u.5   11442578   transcription termination factor MTEF1, chloroplastic 
 mtr-u.5   120577068   transcription termination factor MTEF1, chloroplastic 
 ath-u.5   AT3G18870   Mitochondrial transcription termination factor family protein 
 vvi-u.5   100853221   transcription termination factor MTEF1, chloroplastic 
 sly-u.5   101266172   transcription termination factor MTEF1, chloroplastic 

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Top 50 coexpressed genes to 7461195 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7461195 (ppo-u.5 coexpression data)

CoexMap"7461195"


ppoLOC7461195 | Entrez gene ID : 7461195    
Species ppo gma mtr ath vvi sly hvu osa sot tae nta bra cit ghi zma bna bdi sbi cre
Paralog 3 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1948 genes)  IEA  
GO CC
GO MF
GO:0003690 [list] [network] double-stranded DNA binding  (569 genes)  IEA  
Protein XP_024455286.1 [sequence] [blastp]
XP_052308064.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  chlo_mito 4,  nucl 1,  mito 1,  cyto_nucl 1  (predict for XP_024455286.1)
chlo 6,  chlo_mito 4,  nucl 1,  mito 1,  cyto_nucl 1  (predict for XP_052308064.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_024455286.1)
chlo 8  (predict for XP_052308064.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7461195

.
ppo-r.4
for
7461195

.
ppo-m.4
for
7461195

.
gma-u.5
for
100812333

.
mtr-u.5
for
11442578

.
mtr-u.5
for
120577068

.
ath-u.5
for
AT3G18870

.
vvi-u.5
for
100853221

.
sly-u.5
for
101266172

.


Ortholog ID: 12655
Species ath gma sly bra vvi ppo mtr mtr ghi ghi bna sot cit nta
Symbol AT3G18870 LOC100812333 LOC101266172 LOC103869515 LOC100853221 LOC7461195 LOC120577068 LOC11442578 LOC107898758 LOC107945162 BNAC05G34150D LOC107058496 LOC102620107 LOC107793268
Function* Mitochondrial transcription termination factor family protein transcription termination factor MTEF1, chloroplastic transcription termination factor MTEF1, chloroplastic transcription termination factor MTEF1, chloroplastic transcription termination factor MTEF1, chloroplastic transcription termination factor MTEF1, chloroplastic transcription termination factor MTEF1, chloroplastic transcription termination factor MTEF1, chloroplastic transcription termination factor MTEF1, chloroplastic transcription termination factor MTEF1, chloroplastic transcription termination factor MTEF1, chloroplastic uncharacterized LOC107058496 transcription termination factor MTEF1, chloroplastic transcription termination factor MTEF1, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00790 Folate biosynthesis 2
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00710 Carbon fixation by Calvin cycle 3
vvi01200 Carbon metabolism 3
vvi00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04626 Plant-pathogen interaction 2
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 4
sot00190 Oxidative phosphorylation 2
sot01200 Carbon metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821420 100812333 101266172 103869515 100853221 7461195 120577068 11442578 107898758 107945162 106446849 107058496 102620107 107793268
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