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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7461659   uncharacterized LOC7461659 
 ppo-r.4   7461659   uncharacterized LOC7461659 
 ppo-m.4   7461659   uncharacterized LOC7461659 
 ppo-u.5   7496633   uncharacterized LOC7496633 
 gma-u.5   100779218   UBX domain-containing protein 1 
 gma-u.5   100794687   UBX domain-containing protein 1 
 mtr-u.5   11411366   UBX domain-containing protein 1 
 mtr-u.5   25500338   UBX domain-containing protein 1 
 ath-u.5   AT1G04850   ubiquitin-associated (UBA)/TS-N domain-containing protein 
 vvi-u.5   100248761   uncharacterized LOC100248761 
 vvi-u.5   100264566   uncharacterized LOC100264566 
 sly-u.5   101260080   uncharacterized LOC101260080 
 sly-u.5   101261210   uncharacterized LOC101261210 
 osa-u.5   4346099   uncharacterized LOC4346099 
 osa-u.5   4329431   uncharacterized LOC4329431 
 zma-u.5   100279866   uncharacterized LOC100279866 
 zma-u.5   100274362   ubiquitin-associated (UBA)/TS-N domain-containing protein 

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Top 50 coexpressed genes to 7461659 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7461659 (ppo-u.5 coexpression data)

CoexMap"7461659"


ppoLOC7461659 | Entrez gene ID : 7461659    
Species ppo gma mtr ath vvi sly osa zma tae hvu ghi bdi cit bra cre sbi bna nta sot
Paralog 4 2 2 1 2 2 2 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop04141 [list] [network] Protein processing in endoplasmic reticulum (286 genes)
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_002300167.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  cyto 3  (predict for XP_002300167.1)
Subcellular
localization
TargetP
other 5  (predict for XP_002300167.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7461659

.
ppo-r.4
for
7461659

.
ppo-m.4
for
7461659

.
ppo-u.5
for
7496633

.
gma-u.5
for
100779218

.
gma-u.5
for
100794687

.
mtr-u.5
for
11411366

.
mtr-u.5
for
25500338

.
ath-u.5
for
AT1G04850

.
vvi-u.5
for
100248761

.
vvi-u.5
for
100264566

.
sly-u.5
for
101260080

.
sly-u.5
for
101261210

.
osa-u.5
for
4346099

.
osa-u.5
for
4329431

.
zma-u.5
for
100279866

.
zma-u.5
for
100274362

.


Ortholog ID: 3386
Species ath gma sly sly osa osa zma bra bra vvi vvi ppo mtr mtr hvu hvu ghi bna bna cre sbi sot cit cit bdi bdi nta nta
Symbol AT1G04850 LOC100794687 LOC101260080 LOC101261210 LOC4329431 LOC4346099 LOC100279866 LOC103836551 LOC103874980 LOC100264566 LOC100248761 LOC7461659 LOC11411366 LOC25500338 LOC123410236 LOC123401925 LOC107887882 LOC106430234 LOC106401861 CHLRE_01g030550v5 LOC8056074 LOC102584411 LOC102615084 LOC102610787 LOC100839538 LOC100822459 LOC107811850 LOC107816495
Function* ubiquitin-associated (UBA)/TS-N domain-containing protein UBX domain-containing protein 1 uncharacterized LOC101260080 uncharacterized LOC101261210 uncharacterized LOC4329431 uncharacterized LOC4346099 uncharacterized LOC100279866 translation initiation factor IF-2-like UBX domain-containing protein 1 uncharacterized LOC100264566 uncharacterized LOC100248761 uncharacterized LOC7461659 UBX domain-containing protein 1 UBX domain-containing protein 1 UBX domain-containing protein 1-A-like GRB10-interacting GYF protein 2 vicilin-like seed storage protein At2g18540 translation initiation factor IF-2 caldesmon uncharacterized protein chromatin assembly factor 1 subunit A troponin T, fast skeletal muscle uncharacterized LOC102615084 uncharacterized LOC102610787 UBX domain-containing protein 1 UBX domain-containing protein 1 uncharacterized LOC107811850 uncharacterized LOC107816495
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 5
ath04141 Protein processing in endoplasmic reticulum 3
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 4
gma04141 Protein processing in endoplasmic reticulum 3
gma03040 Spliceosome 2
gma00510 N-Glycan biosynthesis 2
gma00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00902 Monoterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 5
osa04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
osa00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 6
zma03040 Spliceosome 3
zma03015 mRNA surveillance pathway 2
zma04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 6
bra00190 Oxidative phosphorylation 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 2
vvi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 11
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 4
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 5
hvu04517 IgSF CAM signaling 2
hvu05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 2
ghi04141 Protein processing in endoplasmic reticulum 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 4
bna04144 Endocytosis 2
bna03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04141 Protein processing in endoplasmic reticulum 6
cre03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 6
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 10
nta04141 Protein processing in endoplasmic reticulum 2
nta03060 Protein export 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 839399 100794687 101260080 101261210 4329431 4346099 100279866 103836551 103874980 100264566 100248761 7461659 11411366 25500338 123410236 123401925 107887882 106430234 106401861 5715368 8056074 102584411 102615084 102610787 100839538 100822459 107811850 107816495
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