ATTED-II : GeneCoexpression result

Species	Gene	Description
ppo-u.5	7496633	uncharacterized LOC7496633
ppo-r.4	7496633	uncharacterized LOC7496633
ppo-m.4	7496633	uncharacterized LOC7496633
ppo-u.5	7461659	uncharacterized LOC7461659
gma-u.5	100779218	UBX domain-containing protein 1
gma-u.5	100794687	UBX domain-containing protein 1
mtr-u.5	11411366	UBX domain-containing protein 1
mtr-u.5	25500338	UBX domain-containing protein 1
ath-u.5	AT1G04850	ubiquitin-associated (UBA)/TS-N domain-containing protein
vvi-u.5	100248761	uncharacterized LOC100248761
vvi-u.5	100264566	uncharacterized LOC100264566
sly-u.5	101260080	uncharacterized LOC101260080
sly-u.5	101261210	uncharacterized LOC101261210
osa-u.5	4346099	uncharacterized LOC4346099
osa-u.5	4329431	uncharacterized LOC4329431
zma-u.5	100279866	uncharacterized LOC100279866
zma-u.5	100274362	ubiquitin-associated (UBA)/TS-N domain-containing protein

Annotation

functional annotation

KEGG

pop04141 [list] [network] Protein processing in endoplasmic reticulum (286 genes)

GO BP

GO CC

GO MF

GO:0005515 [list] [network] protein binding

(4916 genes)

IEA

Protein

XP_002323789.2 [sequence] [blastp]
XP_024443971.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 6, cyto 2, mito 1	(predict for XP_002323789.2)
nucl 6, cyto 2, mito 1	(predict for XP_024443971.1)

Subcellular
localization
TargetP

other 5	(predict for XP_002323789.2)
other 5	(predict for XP_024443971.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 7496633	ppo-r.4 for 7496633	ppo-m.4 for 7496633	ppo-u.5 for 7461659	gma-u.5 for 100779218	gma-u.5 for 100794687	mtr-u.5 for 11411366	mtr-u.5 for 25500338	ath-u.5 for AT1G04850	vvi-u.5 for 100248761	vvi-u.5 for 100264566	sly-u.5 for 101260080	sly-u.5 for 101261210	osa-u.5 for 4346099	osa-u.5 for 4329431	zma-u.5 for 100279866	zma-u.5 for 100274362

Ortholog

Ortholog ID: 3386

Species

ppo

gma

mtr

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

hvu

sbi

bdi

cre

Symbol

Function^*

uncharacterized LOC7461659

UBX domain-containing protein 1

ubiquitin-associated (UBA)/TS-N domain-containing protein

translation initiation factor IF-2-like

UBX domain-containing protein 1

uncharacterized LOC100264566

uncharacterized LOC100248761

vicilin-like seed storage protein At2g18540

translation initiation factor IF-2

caldesmon

uncharacterized LOC102615084

uncharacterized LOC102610787

uncharacterized LOC101260080

uncharacterized LOC101261210

troponin T, fast skeletal muscle

uncharacterized LOC107811850

uncharacterized LOC107816495

uncharacterized LOC4329431

uncharacterized LOC4346099

uncharacterized LOC100279866

UBX domain-containing protein 1-A-like

GRB10-interacting GYF protein 2

chromatin assembly factor 1 subunit A

UBX domain-containing protein 1

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03050	Proteasome	11
ppo04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	4
gma04141	Protein processing in endoplasmic reticulum	3
gma03040	Spliceosome	2
gma00510	N-Glycan biosynthesis	2
gma00513	Various types of N-glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00190	Oxidative phosphorylation	4
mtr03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03050	Proteasome	5
ath04141	Protein processing in endoplasmic reticulum	3
ath03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03050	Proteasome	6
bra00190	Oxidative phosphorylation	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	2
vvi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03082	ATP-dependent chromatin remodeling	2
ghi04141	Protein processing in endoplasmic reticulum	2
ghi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04141	Protein processing in endoplasmic reticulum	4
bna04144	Endocytosis	2
bna03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04141	Protein processing in endoplasmic reticulum	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00902	Monoterpenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	2
sly03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03050	Proteasome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03050	Proteasome	10
nta04141	Protein processing in endoplasmic reticulum	2
nta03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03050	Proteasome	5
osa04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03040	Spliceosome	2
osa00100	Steroid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03050	Proteasome	6
zma03040	Spliceosome	3
zma03015	mRNA surveillance pathway	2
zma04382	Cornified envelope formation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04144	Endocytosis	5
hvu04517	IgSF CAM signaling	2
hvu05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03050	Proteasome	6
bdi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre04141	Protein processing in endoplasmic reticulum	6
cre03040	Spliceosome	2

Expression

Expression pattern

Entrez Gene ID^*

7461659

100794687

11411366

25500338

839399

103836551

103874980

100264566

100248761

107887882

106430234

106401861

102615084

102610787

101260080

101261210

102584411

107811850

107816495

4329431

4346099

100279866

123410236

123401925

8056074

100839538

100822459

5715368

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 7496633 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7496633 (ppo-u.5 coexpression data)


Species	ppo	gma	mtr	ath	vvi	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	4	2	2	1	2	2	2	2	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 7496633 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7496633 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**