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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-m.4   7461772   putative recombination initiation defects 3 
 mtr-u.5   11444577   putative recombination initiation defects 3 
 ath-u.5   PRD3   putative recombination initiation defects 3 
 osa-u.5   4331321   protein PAIR1-like 
 zma-u.5   103630570   protein PAIR1 
 zma-u.5   100192912   uncharacterized LOC100192912 

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Top 50 coexpressed genes to 7461772 (ppo-m.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7461772 (ppo-m.4 coexpression data)

CoexMap"7461772"


ppoLOC7461772 | Entrez gene ID : 7461772    
Species ppo mtr ath osa zma sly sbi nta bra cre vvi cit hvu bdi sot tae bna ghi gma
Paralog 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009553 [list] [network] embryo sac development  (2 genes)  IEA  
GO:0009556 [list] [network] microsporogenesis  (2 genes)  IEA  
GO:0042138 [list] [network] meiotic DNA double-strand break formation  (10 genes)  IEA  
GO:0070192 [list] [network] chromosome organization involved in meiotic cell cycle  (24 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (3662 genes)  IEA  
GO MF
Protein XP_002302589.4 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  mito 4,  nucl 2  (predict for XP_002302589.4)
Subcellular
localization
TargetP
chlo 8  (predict for XP_002302589.4)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-m.4
for
7461772

.
mtr-u.5
for
11444577

.
ath-u.5
for
PRD3

.
osa-u.5
for
4331321

.
zma-u.5
for
103630570

.
zma-u.5
for
100192912

.


Ortholog ID: 4824
Species ath osa zma zma bra mtr hvu bna nta nta
Symbol PRD3 LOC4331321 LOC100192912 LOC103630570 LOC103844671 LOC11444577 LOC123449951 LOC106370855 LOC107827597 LOC107811522
Function* putative recombination initiation defects 3 protein PAIR1-like uncharacterized LOC100192912 protein PAIR1 putative recombination initiation defects 3 putative recombination initiation defects 3 protein PAIR1-like putative recombination initiation defects 3 putative recombination initiation defects 3 putative recombination initiation defects 3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01200 Carbon metabolism 10
zma00020 Citrate cycle (TCA cycle) 9
zma01210 2-Oxocarboxylic acid metabolism 6
zma00640 Propanoate metabolism 6
zma00010 Glycolysis / Gluconeogenesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03030 DNA replication 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 2
bna04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 2
nta03420 Nucleotide excision repair 2
nta03430 Mismatch repair 2
nta03440 Homologous recombination 2
nta03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 4
nta03030 DNA replication 2
nta03420 Nucleotide excision repair 2
nta03430 Mismatch repair 2
nta03460 Fanconi anemia pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 839243 4331321 100192912 103630570 103844671 11444577 123449951 106370855 107827597 107811522
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