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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7464413   uncharacterized LOC7464413 
 ppo-r.4   7464413   uncharacterized LOC7464413 
 ppo-u.5   7461479   uncharacterized LOC7461479 
 gma-u.5   100794246   uncharacterized LOC100794246 
 gma-u.5   100817857   uncharacterized LOC100817857 
 mtr-u.5   11443501   uncharacterized LOC11443501 
 mtr-u.5   25484186   uncharacterized LOC25484186 
 ath-u.5   AT5G43930   Transducin family protein / WD-40 repeat family protein 
 ath-u.5   AT1G04140   Transducin family protein / WD-40 repeat family protein 
 vvi-u.5   100246400   uncharacterized LOC100246400 
 vvi-u.5   100263178   uncharacterized LOC100263178 
 sly-u.5   101247260   uncharacterized LOC101247260 
 sly-u.5   101245950   uncharacterized LOC101245950 
 osa-u.5   4329056   uncharacterized LOC4329056 
 osa-u.5   4346650   uncharacterized LOC4346650 
 zma-u.5   103641534   Protein RAE1 
 zma-u.5   103646691   uncharacterized LOC103646691 
 zma-u.5   100382568   Transducin family protein / WD-40 repeat family protein 

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Top 50 coexpressed genes to 7464413 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7464413 (ppo-u.5 coexpression data)

CoexMap"7464413"


ppoLOC7464413 | Entrez gene ID : 7464413    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 2 2 2 2 2 2 3 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006914 [list] [network] autophagy  (72 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (6743 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_024441078.1 [sequence] [blastp]
XP_052303031.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  nucl 3  (predict for XP_024441078.1)
chlo 5,  nucl 2,  vacu 2  (predict for XP_052303031.1)
Subcellular
localization
TargetP
chlo 4,  other 3  (predict for XP_024441078.1)
chlo 4,  other 3  (predict for XP_052303031.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7464413

.
ppo-r.4
for
7464413

.
ppo-u.5
for
7461479

.
gma-u.5
for
100794246

.
gma-u.5
for
100817857

.
mtr-u.5
for
11443501

.
mtr-u.5
for
25484186

.
ath-u.5
for
AT5G43930

.
ath-u.5
for
AT1G04140

.
vvi-u.5
for
100246400

.
vvi-u.5
for
100263178

.
sly-u.5
for
101247260

.
sly-u.5
for
101245950

.
osa-u.5
for
4329056

.
osa-u.5
for
4346650

.
zma-u.5
for
103641534

.
zma-u.5
for
103646691

.
zma-u.5
for
100382568

.


Ortholog ID: 3984
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna cre sbi sbi sot sot cit cit bdi nta nta
Symbol AT1G04140 AT5G43930 LOC100794246 LOC100817857 LOC101247260 LOC101245950 LOC4346650 LOC4329056 LOC100382568 LOC103641534 LOC103843670 LOC103836591 LOC100263178 LOC100246400 LOC7461479 LOC7464413 LOC11443501 LOC25484186 LOC123114386 LOC123123889 LOC123395164 LOC107929113 LOC107952744 LOC125577216 LOC125591571 CHLRE_16g655400v5 LOC8064654 LOC8086481 LOC102599622 LOC102584562 LOC102630449 LOC102626177 LOC100829808 LOC107822349 LOC107828304
Function* Transducin family protein / WD-40 repeat family protein Transducin family protein / WD-40 repeat family protein uncharacterized LOC100794246 uncharacterized LOC100817857 uncharacterized LOC101247260 uncharacterized LOC101245950 uncharacterized LOC4346650 uncharacterized LOC4329056 Transducin family protein / WD-40 repeat family protein Protein RAE1 uncharacterized LOC103843670 uncharacterized LOC103836591 uncharacterized LOC100263178 uncharacterized LOC100246400 uncharacterized LOC7461479 uncharacterized LOC7464413 uncharacterized LOC11443501 uncharacterized LOC25484186 uncharacterized LOC123114386 uncharacterized LOC123123889 uncharacterized LOC123395164 uncharacterized LOC107929113 uncharacterized LOC107952744 uncharacterized LOC125577216 uncharacterized LOC125591571 uncharacterized protein uncharacterized LOC8064654 uncharacterized LOC8086481 uncharacterized LOC102599622 uncharacterized LOC102584562 uncharacterized LOC102630449 uncharacterized LOC102626177 uncharacterized LOC100829808 uncharacterized LOC107822349 uncharacterized LOC107828304
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
sly03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 3
bra03018 RNA degradation 3
bra03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 2
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 2
mtr03015 mRNA surveillance pathway 2
mtr00230 Purine metabolism 2
mtr01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03083 Polycomb repressive complex 3
tae03250 Viral life cycle - HIV-1 3
tae04016 MAPK signaling pathway - plant 2
tae04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae02010 ABC transporters 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00760 Nicotinate and nicotinamide metabolism 2
ghi01240 Biosynthesis of cofactors 2
ghi04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 2
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 2
sot04148 Efferocytosis 2
sot04142 Lysosome 2
sot04144 Endocytosis 2
sot05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 3
cit01230 Biosynthesis of amino acids 3
cit00500 Starch and sucrose metabolism 2
cit00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 4
nta02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 839272 834415 100794246 100817857 101247260 101245950 4346650 4329056 100382568 103641534 103843670 103836591 100263178 100246400 7461479 7464413 11443501 25484186 123114386 123123889 123395164 107929113 107952744 125577216 125591571 66056533 8064654 8086481 102599622 102584562 102630449 102626177 100829808 107822349 107828304
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