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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-m.4   7465372   pentatricopeptide repeat-containing protein At5g66520 
 mtr-u.5   11432546   pentatricopeptide repeat-containing protein At2g22070 
 vvi-u.5   100267935   pentatricopeptide repeat-containing protein At5g66520 
 osa-u.5   4327956   pentatricopeptide repeat-containing protein At1g33350 

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Top 50 coexpressed genes to 7465372 (ppo-m.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7465372 (ppo-m.4 coexpression data)

CoexMap"7465372"


ppoLOC7465372 | Entrez gene ID : 7465372    
Species ppo mtr vvi osa sly sbi nta bra cre hvu cit bdi sot zma tae ath bna ghi gma
Paralog 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (384 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1480 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_002304609.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 3,  cyto_mito 2  (predict for XP_002304609.1)
Subcellular
localization
TargetP
mito 8  (predict for XP_002304609.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-m.4
for
7465372

.
mtr-u.5
for
11432546

.
vvi-u.5
for
100267935

.
osa-u.5
for
4327956

.


Ortholog ID: 13297
Species osa vvi mtr ghi ghi sbi sot cit bdi nta
Symbol LOC4327956 LOC100267935 LOC11432546 LOC121218599 LOC107939524 LOC8082398 LOC102583717 LOC102612926 LOC100837361 LOC107759855
Function* pentatricopeptide repeat-containing protein At1g33350 pentatricopeptide repeat-containing protein At5g66520 pentatricopeptide repeat-containing protein At2g22070 pentatricopeptide repeat-containing protein At5g66520 pentatricopeptide repeat-containing protein At5g66520 pentatricopeptide repeat-containing protein At1g33350 pentatricopeptide repeat-containing protein At5g66520-like pentatricopeptide repeat-containing protein At5g66520-like pentatricopeptide repeat-containing protein At1g33350 pentatricopeptide repeat-containing protein ELI1, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01230 Biosynthesis of amino acids 6
bdi01200 Carbon metabolism 5
bdi00260 Glycine, serine and threonine metabolism 3
bdi00270 Cysteine and methionine metabolism 3
bdi00710 Carbon fixation by Calvin cycle 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 4327956 100267935 11432546 121218599 107939524 8082398 102583717 102612926 100837361 107759855
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