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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5  7465419  chorismate mutase 2 
 ppo-r.4  7465419  chorismate mutase 2 
 ppo-m.4  7465419  chorismate mutase 2 
 gma-u.5  100808361  chorismate mutase, chloroplastic-like 
 gma-u.5  100791341  chorismate mutase 2 
 mtr-u.5  11426746  chorismate mutase 2 
 mtr-u.5  11428755  chorismate mutase 2 
 ath-u.5  CM2  chorismate mutase 2 
 bra-r.6  103850294  chorismate mutase 2 
 vvi-u.5  100261098  chorismate mutase 2 
 bna-r.1  106383385  chorismate mutase 2 
 cit-r.1  102628351  chorismate mutase 2 
 sly-u.5  543970  chorimate mutase 
 sot-r.1  102589786  chorismate mutase 2 
 nta-r.1  107805472  chorismate mutase 2 
 nta-r.1  107788688  chorismate mutase 2-like 
 osa-u.5  4328508  chorismate mutase 2, cytosolic 
 zma-u.5  100191856  chorismate mutase 
 zma-u.5  103653478  chorismate mutase 2, cytosolic-like 
 tae-r.2  123151922  chorismate mutase 2, cytosolic 
 tae-r.2  123144053  chorismate mutase 2, cytosolic 
 hvu-r.1  123401713  chorismate mutase 2, cytosolic 
 sbi-r.1  8077626  chorismate mutase 2 
 sbi-r.1  8080609  chorismate mutase 2 
 bdi-r.1  100832477  chorismate mutase 2 
 bdi-r.1  100832337  chorismate mutase 2 

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Top 50 coexpressed genes to 7465419 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7465419 (ppo-u.5 coexpression data)

CoexMap"7465419"


ppoLOC7465419 | Entrez gene ID : 7465419
Species ppo gma mtr ath bra vvi bna cit sly sot nta osa zma tae hvu sbi bdi cre ghi
Paralog 3 2 2 1 1 1 1 1 1 1 2 1 2 2 1 2 2 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop00400 [list] [network] Phenylalanine, tyrosine and tryptophan biosynthesis (58 genes)
pop01230 [list] [network] Biosynthesis of amino acids (287 genes)
GO BP
GO:0046417 [list] [network] chorismate metabolic process  (13 genes)  IEA  
GO:0009073 [list] [network] aromatic amino acid family biosynthetic process  (54 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (6111 genes)  IEA  
GO MF
GO:0004106 [list] [network] chorismate mutase activity  (3 genes)  IEA  
Protein XP_002324330.3 [sequence] [blastp]
XP_052304755.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  chlo 2,  mito 2,  cyto_nucl 2,  chlo_mito 2,  cyto_E.R. 2,  cyto_plas 2  (predict for XP_002324330.3)
cyto 4,  chlo 2,  mito 2,  cyto_nucl 2,  chlo_mito 2  (predict for XP_052304755.1)
Subcellular
localization
TargetP
other 8  (predict for XP_002324330.3)
other 8  (predict for XP_052304755.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

ppo-u.5
for
7465419


ppo-r.4
for
7465419


ppo-m.4
for
7465419


gma-u.5
for
100808361


gma-u.5
for
100791341


mtr-u.5
for
11426746


mtr-u.5
for
11428755


ath-u.5
for
CM2


bra-r.6
for
103850294


vvi-u.5
for
100261098


bna-r.1
for
106383385


cit-r.1
for
102628351


sly-u.5
for
543970


sot-r.1
for
102589786


nta-r.1
for
107805472


nta-r.1
for
107788688


osa-u.5
for
4328508


zma-u.5
for
100191856


zma-u.5
for
103653478


tae-r.2
for
123151922


tae-r.2
for
123144053


hvu-r.1
for
123401713


sbi-r.1
for
8077626


sbi-r.1
for
8080609


bdi-r.1
for
100832477


bdi-r.1
for
100832337



Ortholog ID: 6344
Species ppo gma gma mtr mtr ath bra vvi bna cit sly sot nta nta osa zma zma tae tae tae hvu sbi sbi bdi bdi
Symbol LOC7465419 LOC100808361 LOC100791341 LOC11426746 LOC11428755 CM2 LOC103850294 LOC100261098 LOC106383385 LOC102628351 LOC543970 LOC102589786 LOC107805472 LOC107788688 LOC4328508 LOC100191856 LOC103653478 LOC123151922 LOC123136546 LOC123132477 LOC123401713 LOC8077626 LOC8080609 LOC100832477 LOC100832337
Function* chorismate mutase 2 chorismate mutase, chloroplastic-like chorismate mutase 2 chorismate mutase 2 chorismate mutase 2 chorismate mutase 2 chorismate mutase 2 chorismate mutase 2 chorismate mutase 2 chorismate mutase 2 chorimate mutase chorismate mutase 2 chorismate mutase 2 chorismate mutase 2-like chorismate mutase 2, cytosolic chorismate mutase chorismate mutase 2, cytosolic-like chorismate mutase 2, cytosolic chorismate mutase 2, cytosolic chorismate mutase 2, cytosolic chorismate mutase 2, cytosolic chorismate mutase 2 chorismate mutase 2 chorismate mutase 2 chorismate mutase 2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
ppo01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00500 Starch and sucrose metabolism 2
gma04144 Endocytosis 2
gma04517 IgSF CAM signaling 2
gma05100 Bacterial invasion of epithelial cells 2
gma00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 3
gma04144 Endocytosis 3
gma00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
gma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00480 Glutathione metabolism 2
ath01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04626 Plant-pathogen interaction 2
vvi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00040 Pentose and glucuronate interconversions 4
bna04075 Plant hormone signal transduction 3
bna04626 Plant-pathogen interaction 3
bna00511 Other glycan degradation 2
bna00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
nta01230 Biosynthesis of amino acids 2
nta00564 Glycerophospholipid metabolism 2
nta04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
nta01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 2
zma04145 Phagosome 2
zma04148 Efferocytosis 2
zma00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00940 Phenylpropanoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00940 Phenylpropanoid biosynthesis 4
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00260 Glycine, serine and threonine metabolism 3
tae00630 Glyoxylate and dicarboxylate metabolism 3
tae00670 One carbon pool by folate 3
tae00785 Lipoic acid metabolism 3
tae01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
tae01230 Biosynthesis of amino acids 3
tae00770 Pantothenate and CoA biosynthesis 2
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
bdi01230 Biosynthesis of amino acids 3
bdi01200 Carbon metabolism 2
bdi00062 Fatty acid elongation 2
bdi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04626 Plant-pathogen interaction 3
bdi04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 7465419 100808361 100791341 11426746 11428755 830954 103850294 100261098 106383385 102628351 543970 102589786 107805472 107788688 4328508 100191856 103653478 123151922 123136546 123132477 123401713 8077626 8080609 100832477 100832337
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