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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   CM2   chorismate mutase 2 
 ath-r.7   CM2   chorismate mutase 2 
 ath-m.9   CM2   chorismate mutase 2 
 ath-e.2   CM2   chorismate mutase 2 
 ath-m.4.bio   CM2   chorismate mutase 2 
 ath-m.4.hor   CM2   chorismate mutase 2 
 ath-m.4.lig   CM2   chorismate mutase 2 
 ath-m.4.str   CM2   chorismate mutase 2 
 ath-m.4.tis   CM2   chorismate mutase 2 
 gma-u.5   100808361   chorismate mutase, chloroplastic-like 
 gma-u.5   100791341   chorismate mutase 2 
 vvi-u.5   100261098   chorismate mutase 2 
 ppo-u.5   7465419   chorismate mutase 2 
 mtr-u.5   11428755   chorismate mutase 2 
 mtr-u.5   11426746   chorismate mutase 2 
 sly-u.5   543970   chorimate mutase 
 osa-u.5   4328508   chorismate mutase 2, cytosolic 
 zma-u.5   103653478   chorismate mutase 2, cytosolic-like 
 zma-u.5   100191856   chorismate mutase 

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Top 50 coexpressed genes to CM2 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CM2 (ath-u.5 coexpression data)

CoexMap"830954"


athCM2 | Entrez gene ID : 830954      
Species ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 9 2 1 1 2 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath00400 [list] [network] Phenylalanine, tyrosine and tryptophan biosynthesis (56 genes)
ath01230 [list] [network] Biosynthesis of amino acids (242 genes)
GO BP
GO:1901747 [list] [network] prephenate(2-) biosynthetic process  (3 genes)  IDA  
GO:0009073 [list] [network] aromatic amino acid family biosynthetic process  (50 genes)  IDA TAS  
GO CC
GO:0005829 [list] [network] cytosol  (2593 genes)  ISS  
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO MF
GO:0004106 [list] [network] chorismate mutase activity  (3 genes)  IDA IGI  
GO:0042803 [list] [network] protein homodimerization activity  (237 genes)  IDA  
Protein NP_196648.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 4,  cyto 1,  mito 1  (predict for NP_196648.1)
Subcellular
localization
TargetP
other 7  (predict for NP_196648.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
CM2
ath-r.7
for
CM2
ath-m.9
for
CM2
ath-e.2
for
CM2
ath-m.4.bio
for
CM2
ath-m.4.hor
for
CM2
ath-m.4.lig
for
CM2
ath-m.4.str
for
CM2
ath-m.4.tis
for
CM2
gma-u.5
for
100808361
gma-u.5
for
100791341
vvi-u.5
for
100261098
ppo-u.5
for
7465419
mtr-u.5
for
11428755
mtr-u.5
for
11426746
sly-u.5
for
543970
osa-u.5
for
4328508
zma-u.5
for
103653478
zma-u.5
for
100191856


Ortholog ID: 6344
Species ath bra bna cit gma vvi ppo mtr mtr sly sot nta nta osa zma zma tae tae hvu sbi sbi bdi bdi
Symbol CM2 LOC103850294 LOC106383385 LOC102628351 LOC100791341 LOC100261098 LOC7465419 LOC11428755 LOC11426746 LOC543970 LOC102589786 LOC107805472 LOC107788688 LOC4328508 LOC103653478 LOC100191856 LOC123136546 LOC123151922 LOC123401713 LOC8077626 LOC8080609 LOC100832337 LOC100832477
Function* chorismate mutase 2 chorismate mutase 2 chorismate mutase 2 chorismate mutase 2 chorismate mutase 2 chorismate mutase 2 chorismate mutase 2 chorismate mutase 2 chorismate mutase 2 chorimate mutase chorismate mutase 2 chorismate mutase 2 chorismate mutase 2-like chorismate mutase 2, cytosolic chorismate mutase 2, cytosolic-like chorismate mutase chorismate mutase 2, cytosolic chorismate mutase 2, cytosolic chorismate mutase 2, cytosolic chorismate mutase 2 chorismate mutase 2 chorismate mutase 2 chorismate mutase 2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00480 Glutathione metabolism 2
ath01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00040 Pentose and glucuronate interconversions 4
bna04075 Plant hormone signal transduction 3
bna04626 Plant-pathogen interaction 3
bna00511 Other glycan degradation 2
bna00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 3
gma04144 Endocytosis 3
gma00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
gma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04626 Plant-pathogen interaction 2
vvi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
ppo01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
nta01230 Biosynthesis of amino acids 2
nta00564 Glycerophospholipid metabolism 2
nta04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
nta01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00940 Phenylpropanoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 2
zma04145 Phagosome 2
zma04148 Efferocytosis 2
zma00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00260 Glycine, serine and threonine metabolism 3
tae00630 Glyoxylate and dicarboxylate metabolism 3
tae00670 One carbon pool by folate 3
tae00785 Lipoic acid metabolism 3
tae01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00940 Phenylpropanoid biosynthesis 4
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04626 Plant-pathogen interaction 3
bdi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
bdi01230 Biosynthesis of amino acids 3
bdi01200 Carbon metabolism 2
bdi00062 Fatty acid elongation 2
bdi04626 Plant-pathogen interaction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 830954 103850294 106383385 102628351 100791341 100261098 7465419 11428755 11426746 543970 102589786 107805472 107788688 4328508 103653478 100191856 123136546 123151922 123401713 8077626 8080609 100832337 100832477
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