ATTED-II : GeneCoexpression result

Species	Gene	Description
ppo-u.5	7466040	reticulon-like protein B12
ppo-r.4	7466040	reticulon-like protein B12
ppo-m.4	7466040	reticulon-like protein B12
gma-u.5	100809125	reticulon-like protein B12
gma-u.5	100775554	reticulon-like protein B12
mtr-u.5	11417883	reticulon-like protein B12
ath-u.5	AT3G54120	Reticulon family protein
vvi-u.5	100266674	reticulon-like protein B12
sly-u.5	101255422	reticulon-like protein B12
osa-u.5	4335583	reticulon-like protein B12
zma-u.5	103651007	reticulon-like protein B12
zma-u.5	100284399	uncharacterized LOC100284399

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_024443104.1 [sequence] [blastp]

Subcellular
localization
wolf

mito 4, chlo_mito 4, chlo 2, plas 1, extr 1, E.R. 1, golg 1, golg_plas 1, E.R._plas 1

(predict for XP_024443104.1)

Subcellular
localization
TargetP

other 8, mito 6

(predict for XP_024443104.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 7466040	ppo-r.4 for 7466040	ppo-m.4 for 7466040	gma-u.5 for 100809125	gma-u.5 for 100775554	mtr-u.5 for 11417883	ath-u.5 for AT3G54120	vvi-u.5 for 100266674	sly-u.5 for 101255422	osa-u.5 for 4335583	zma-u.5 for 103651007	zma-u.5 for 100284399

Ortholog ID: 10149

Species

ppo

gma

mtr

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

sbi

Symbol

Function^*

reticulon-like protein B12

Reticulon family protein

reticulon-like protein B12

uncharacterized LOC100284399

reticulon-like protein B12

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04145	Phagosome	3
ppo04517	IgSF CAM signaling	3
ppo04814	Motor proteins	3
ppo00260	Glycine, serine and threonine metabolism	3
ppo01200	Carbon metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma01240	Biosynthesis of cofactors	4
gma00270	Cysteine and methionine metabolism	2
gma00670	One carbon pool by folate	2
gma00999	Biosynthesis of various plant secondary metabolites	2
gma01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04814	Motor proteins	2
gma00040	Pentose and glucuronate interconversions	2
gma00541	Biosynthesis of various nucleotide sugars	2
gma01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00260	Glycine, serine and threonine metabolism	2
vvi00630	Glyoxylate and dicarboxylate metabolism	2
vvi00670	One carbon pool by folate	2
vvi01200	Carbon metabolism	2
vvi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00190	Oxidative phosphorylation	10
ghi04145	Phagosome	9
ghi04141	Protein processing in endoplasmic reticulum	4
ghi03060	Protein export	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00190	Oxidative phosphorylation	10
ghi04145	Phagosome	9
ghi04141	Protein processing in endoplasmic reticulum	4
ghi03060	Protein export	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00240	Pyrimidine metabolism	2
bna01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00240	Pyrimidine metabolism	2
bna01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	4
cit04141	Protein processing in endoplasmic reticulum	3
cit03083	Polycomb repressive complex	2
cit04120	Ubiquitin mediated proteolysis	2
cit04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00510	N-Glycan biosynthesis	5
sot04141	Protein processing in endoplasmic reticulum	5
sot00190	Oxidative phosphorylation	5
sot04142	Lysosome	5
sot04145	Phagosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03015	mRNA surveillance pathway	4
nta00940	Phenylpropanoid biosynthesis	4
nta00270	Cysteine and methionine metabolism	4
nta00450	Selenocompound metabolism	4
nta01230	Biosynthesis of amino acids	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03015	mRNA surveillance pathway	4
nta00940	Phenylpropanoid biosynthesis	4
nta00270	Cysteine and methionine metabolism	4
nta00450	Selenocompound metabolism	4
nta01230	Biosynthesis of amino acids	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03050	Proteasome	3
osa04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04141	Protein processing in endoplasmic reticulum	4
zma04142	Lysosome	3
zma00190	Oxidative phosphorylation	2
zma04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04814	Motor proteins	6
sbi04145	Phagosome	4
sbi04517	IgSF CAM signaling	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04141	Protein processing in endoplasmic reticulum	8
sbi03060	Protein export	2

Expression

Expression pattern

Entrez Gene ID^*

7466040

100775554

100809125

11417883

824579

103829965

100266674

107948864

107899033

106353680

125589278

102607847

101255422

102582482

107801266

107805153

4335583

103651007

100284399

8066573

8058915

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 7466040 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7466040 (ppo-u.5 coexpression data)


Species	ppo	gma	mtr	ath	vvi	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	3	2	1	1	1	1	1	2	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 7466040 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7466040 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**