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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7466419   psbP domain-containing protein 4, chloroplastic 
 ppo-r.4   7466419   psbP domain-containing protein 4, chloroplastic 
 ppo-m.4   7466419   psbP domain-containing protein 4, chloroplastic 
 gma-u.5   100800838   psbP domain-containing protein 4, chloroplastic 
 gma-u.5   100785447   psbP domain-containing protein 4, chloroplastic 
 mtr-u.5   11418122   psbP domain-containing protein 4, chloroplastic 
 ath-u.5   AT1G77090   thylakoid lumenal protein (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein) 
 vvi-u.5   100252244   psbP domain-containing protein 4, chloroplastic 
 sly-u.5   101259835   psbP domain-containing protein 4, chloroplastic 
 osa-u.5   4351700   psbP domain-containing protein 4, chloroplastic 
 zma-u.5   100282037   uncharacterized LOC100282037 

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Top 50 coexpressed genes to 7466419 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7466419 (ppo-u.5 coexpression data)

CoexMap"7466419"


ppoLOC7466419 | Entrez gene ID : 7466419    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0015979 [list] [network] photosynthesis  (119 genes)  IEA  
GO CC
GO:0009654 [list] [network] photosystem II oxygen evolving complex  (22 genes)  IEA  
GO:0009523 [list] [network] photosystem II  (39 genes)  IEA  
GO:0019898 [list] [network] extrinsic component of membrane  (49 genes)  IEA  
GO MF
GO:0005509 [list] [network] calcium ion binding  (301 genes)  IEA  
Protein XP_002300943.1 [sequence] [blastp]
XP_024450762.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  cyto 3,  chlo_mito 3  (predict for XP_002300943.1)
cyto 5,  mito 2,  chlo 1,  nucl 1  (predict for XP_024450762.1)
Subcellular
localization
TargetP
mito 6,  other 3  (predict for XP_002300943.1)
other 7,  mito 5  (predict for XP_024450762.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7466419

.
ppo-r.4
for
7466419

.
ppo-m.4
for
7466419

.
gma-u.5
for
100800838

.
gma-u.5
for
100785447

.
mtr-u.5
for
11418122

.
ath-u.5
for
AT1G77090

.
vvi-u.5
for
100252244

.
sly-u.5
for
101259835

.
osa-u.5
for
4351700

.
zma-u.5
for
100282037

.


Ortholog ID: 9297
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT1G77090 LOC100785447 LOC100800838 LOC101259835 LOC4351700 LOC100282037 LOC103832161 LOC100252244 LOC7466419 LOC11418122 LOC123045916 LOC123189673 LOC123427132 LOC107910422 LOC107952020 LOC106440718 LOC106377232 CHLRE_03g198950v5 LOC8082785 LOC102599300 LOC102614526 LOC100842804 LOC107770985 LOC107787263
Function* thylakoid lumenal protein (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein) psbP domain-containing protein 4, chloroplastic psbP domain-containing protein 4, chloroplastic psbP domain-containing protein 4, chloroplastic psbP domain-containing protein 4, chloroplastic uncharacterized LOC100282037 psbP domain-containing protein 4, chloroplastic psbP domain-containing protein 4, chloroplastic psbP domain-containing protein 4, chloroplastic psbP domain-containing protein 4, chloroplastic psbP domain-containing protein 4, chloroplastic psbP domain-containing protein 4, chloroplastic psbP domain-containing protein 4, chloroplastic psbP domain-containing protein 4, chloroplastic psbP domain-containing protein 4, chloroplastic psbP domain-containing protein 4, chloroplastic psbP domain-containing protein 4, chloroplastic-like photosystem II thylakoid lumenal 29.8 kDa protein PsbP psbP domain-containing protein 4, chloroplastic psbP domain-containing protein 4, chloroplastic psbP domain-containing protein 4, chloroplastic psbP domain-containing protein 4, chloroplastic psbP domain-containing protein 4, chloroplastic psbP domain-containing protein 4, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00010 Glycolysis / Gluconeogenesis 2
gma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 4
vvi00630 Glyoxylate and dicarboxylate metabolism 2
vvi00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 2
mtr00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04146 Peroxisome 4
ghi00710 Carbon fixation by Calvin cycle 4
ghi01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00710 Carbon fixation by Calvin cycle 4
ghi01200 Carbon metabolism 4
ghi00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00195 Photosynthesis 3
sbi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 2
sot00710 Carbon fixation by Calvin cycle 2
sot01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 3
nta00190 Oxidative phosphorylation 2
nta00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 2
nta00195 Photosynthesis 2
nta00860 Porphyrin metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 844043 100785447 100800838 101259835 4351700 100282037 103832161 100252244 7466419 11418122 123045916 123189673 123427132 107910422 107952020 106440718 106377232 5718966 8082785 102599300 102614526 100842804 107770985 107787263
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