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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7467181   isoamylase 3, chloroplastic 
 ppo-r.4   7467181   isoamylase 3, chloroplastic 
 ppo-m.4   7467181   isoamylase 3, chloroplastic 
 gma-u.5   100807545   isoamylase 3, chloroplastic 
 gma-u.5   100806342   isoamylase 3, chloroplastic 
 mtr-u.5   11434670   isoamylase 3, chloroplastic 
 ath-u.5   ISA3   isoamylase 3 
 vvi-u.5   100255802   isoamylase 3, chloroplastic 
 sly-u.5   101261524   isoamylase 3, chloroplastic 
 osa-u.5   4347328   isoamylase 3, chloroplastic-like 
 zma-u.5   542095   isoamylase-type starch debranching enzyme ISO3 

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Top 50 coexpressed genes to 7467181 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7467181 (ppo-u.5 coexpression data)

CoexMap"7467181"


ppoLOC7467181 | Entrez gene ID : 7467181    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop00500 [list] [network] Starch and sucrose metabolism (188 genes)
GO BP
GO:0005975 [list] [network] carbohydrate metabolic process  (863 genes)  IEA  
GO CC
GO MF
GO:0004553 [list] [network] hydrolase activity, hydrolyzing O-glycosyl compounds  (482 genes)  IEA  
Protein XP_024451507.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  nucl 2,  cyto 1  (predict for XP_024451507.2)
Subcellular
localization
TargetP
chlo 7  (predict for XP_024451507.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7467181

.
ppo-r.4
for
7467181

.
ppo-m.4
for
7467181

.
gma-u.5
for
100807545

.
gma-u.5
for
100806342

.
mtr-u.5
for
11434670

.
ath-u.5
for
ISA3

.
vvi-u.5
for
100255802

.
sly-u.5
for
101261524

.
osa-u.5
for
4347328

.
zma-u.5
for
542095

.


Ortholog ID: 10172
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta
Symbol ISA3 LOC100807545 LOC100806342 LOC101261524 LOC4347328 LOC542095 LOC103858505 LOC100255802 LOC7467181 LOC11434670 LOC123104041 LOC123112270 LOC123398976 LOC107957785 LOC107905084 LOC106438474 LOC106435675 CHLRE_03g207713v5 LOC110432902 LOC102577824 LOC102616082 LOC100831289 LOC107771936
Function* isoamylase 3 isoamylase 3, chloroplastic isoamylase 3, chloroplastic isoamylase 3, chloroplastic isoamylase 3, chloroplastic-like isoamylase-type starch debranching enzyme ISO3 isoamylase 3, chloroplastic isoamylase 3, chloroplastic isoamylase 3, chloroplastic isoamylase 3, chloroplastic isoamylase 3, chloroplastic isoamylase 3, chloroplastic isoamylase 3, chloroplastic isoamylase 3, chloroplastic isoamylase 3, chloroplastic isoamylase 3, chloroplastic isoamylase 3, chloroplastic uncharacterized protein isoamylase 3, chloroplastic isoamylase isoamylase 3, chloroplastic isoamylase 3, chloroplastic isoamylase 3, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00500 Starch and sucrose metabolism 10
ath00520 Amino sugar and nucleotide sugar metabolism 2
ath01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00500 Starch and sucrose metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00500 Starch and sucrose metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00970 Aminoacyl-tRNA biosynthesis 5
sly00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00500 Starch and sucrose metabolism 8
osa00520 Amino sugar and nucleotide sugar metabolism 4
osa01250 Biosynthesis of nucleotide sugars 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00500 Starch and sucrose metabolism 6
zma00061 Fatty acid biosynthesis 3
zma00620 Pyruvate metabolism 3
zma01212 Fatty acid metabolism 3
zma00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00500 Starch and sucrose metabolism 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00500 Starch and sucrose metabolism 4
vvi00620 Pyruvate metabolism 2
vvi01200 Carbon metabolism 2
vvi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00500 Starch and sucrose metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00500 Starch and sucrose metabolism 7
mtr04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 12
tae00230 Purine metabolism 2
tae00240 Pyrimidine metabolism 2
tae01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 12
tae00230 Purine metabolism 3
tae00240 Pyrimidine metabolism 3
tae01232 Nucleotide metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04517 IgSF CAM signaling 2
ghi04814 Motor proteins 2
ghi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04517 IgSF CAM signaling 2
ghi04814 Motor proteins 2
ghi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 12
bna00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01200 Carbon metabolism 5
cre00500 Starch and sucrose metabolism 5
cre01230 Biosynthesis of amino acids 4
cre00030 Pentose phosphate pathway 4
cre00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00500 Starch and sucrose metabolism 13
sbi00520 Amino sugar and nucleotide sugar metabolism 3
sbi01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00500 Starch and sucrose metabolism 4
bdi00970 Aminoacyl-tRNA biosynthesis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 826481 100807545 100806342 101261524 4347328 542095 103858505 100255802 7467181 11434670 123104041 123112270 123398976 107957785 107905084 106438474 106435675 5725004 110432902 102577824 102616082 100831289 107771936
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