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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7467403   transcription factor bHLH81 
 ppo-r.4   7467403   transcription factor bHLH81 
 ppo-u.5   18104406   transcription factor bHLH80 
 gma-u.5   100527723   uncharacterized LOC100527723 
 mtr-u.5   25491795   transcription factor bHLH80 
 ath-u.5   FBH2   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-u.5   FBH1   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 vvi-u.5   100252707   transcription factor bHLH80 
 sly-u.5   101256189   transcription factor bHLH81-like 

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Top 50 coexpressed genes to 7467403 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7467403 (ppo-u.5 coexpression data)

CoexMap"7467403"


ppoLOC7467403 | Entrez gene ID : 7467403    
Species ppo gma mtr ath vvi sly sbi nta bra osa cre cit hvu bdi sot zma tae bna ghi
Paralog 3 1 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (481 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (3662 genes)  IEA  
GO MF
GO:0000978 [list] [network] RNA polymerase II cis-regulatory region sequence-specific DNA binding  (266 genes)  IEA  
GO:0000981 [list] [network] DNA-binding transcription factor activity, RNA polymerase II-specific  (338 genes)  IEA  
GO:0046983 [list] [network] protein dimerization activity  (520 genes)  IEA  
Protein XP_002325537.3 [sequence] [blastp]
XP_052305688.1 [sequence] [blastp]
XP_052305689.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  chlo 3  (predict for XP_002325537.3)
nucl 7,  chlo 3  (predict for XP_052305688.1)
nucl 9,  chlo 1  (predict for XP_052305689.1)
Subcellular
localization
TargetP
other 6  (predict for XP_002325537.3)
other 6  (predict for XP_052305688.1)
other 6  (predict for XP_052305689.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7467403

.
ppo-r.4
for
7467403

.
ppo-u.5
for
18104406

.
gma-u.5
for
100527723

.
mtr-u.5
for
25491795

.
ath-u.5
for
FBH2

.
ath-u.5
for
FBH1

.
vvi-u.5
for
100252707

.
sly-u.5
for
101256189

.


Ortholog ID: 10124
Species ath gma sly bra vvi ppo ppo mtr ghi ghi bna bna sot cit nta nta
Symbol FBH2 LOC100527723 LOC101256189 LOC103868826 LOC100252707 LOC18104406 LOC7467403 LOC25491795 LOC107895069 LOC107918573 LOC106418755 LOC106451829 LOC102596464 LOC102616664 LOC107830484 LOC107777531
Function* basic helix-loop-helix (bHLH) DNA-binding superfamily protein uncharacterized LOC100527723 transcription factor bHLH81-like transcription factor bHLH80 transcription factor bHLH80 transcription factor bHLH80 transcription factor bHLH81 transcription factor bHLH80 transcription factor bHLH81 transcription factor bHLH81 transcription factor bHLH80-like transcription factor bHLH80 transcription factor bHLH81-like transcription factor bHLH80 transcription factor bHLH80 transcription factor bHLH80
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04016 MAPK signaling pathway - plant 2
ath04070 Phosphatidylinositol signaling system 2
ath04075 Plant hormone signal transduction 2
ath04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04712 Circadian rhythm - plant 3
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00561 Glycerolipid metabolism 2
ppo00510 N-Glycan biosynthesis 2
ppo00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03083 Polycomb repressive complex 2
ppo04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00280 Valine, leucine and isoleucine degradation 6
mtr01210 2-Oxocarboxylic acid metabolism 3
mtr00640 Propanoate metabolism 2
mtr00785 Lipoic acid metabolism 2
mtr00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 2
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 2
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00620 Pyruvate metabolism 2
nta00710 Carbon fixation by Calvin cycle 2
nta01200 Carbon metabolism 2
nta04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00620 Pyruvate metabolism 2
nta00710 Carbon fixation by Calvin cycle 2
nta01200 Carbon metabolism 2
nta04712 Circadian rhythm - plant 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 826499 100527723 101256189 103868826 100252707 18104406 7467403 25491795 107895069 107918573 106418755 106451829 102596464 102616664 107830484 107777531
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