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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7467564   60S ribosomal protein L35a-1 
 ppo-r.4   7467564   60S ribosomal protein L35a-1 
 ppo-m.4   7467564   60S ribosomal protein L35a-1 
 ppo-u.5   7490375   60S ribosomal protein L35a-1 
 ppo-u.5   7458094   60S ribosomal protein L35a-1 
 ppo-u.5   7494468   60S ribosomal protein L35a-1 
 gma-u.5   100800463   60S ribosomal protein L35a-1-like 
 gma-u.5   100499746   uncharacterized LOC100499746 
 gma-u.5   100305997   uncharacterized LOC100305997 
 mtr-u.5   120576892   60S ribosomal protein L35a-1 
 ath-u.5   AT3G55750   Ribosomal protein L35Ae family protein 
 ath-u.5   AT1G07070   Ribosomal protein L35Ae family protein 
 ath-u.5   AT1G41880   Ribosomal protein L35Ae family protein 
 vvi-u.5   100242662   large ribosomal subunit protein eL33w 
 vvi-u.5   100258134   large ribosomal subunit protein eL33w 
 sly-u.5   101265413   large ribosomal subunit protein eL33z 
 sly-u.5   104647572   60S ribosomal protein L35a-3 
 osa-u.5   4339572   large ribosomal subunit protein eL33z 
 osa-u.5   9271790   large ribosomal subunit protein eL33z 
 osa-u.5   4330946   large ribosomal subunit protein eL33w 
 zma-u.5   100282164   60S ribosomal protein L35a-like 
 zma-u.5   100282547   60S ribosomal protein L35Ae-like 
 zma-u.5   100281989   60S ribosomal protein L35a-like 

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Top 50 coexpressed genes to 7467564 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7467564 (ppo-u.5 coexpression data)

CoexMap"7467564"


ppoLOC7467564 | Entrez gene ID : 7467564    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 6 3 1 3 2 2 3 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop03010 [list] [network] Ribosome (698 genes)
GO BP
GO:0042273 [list] [network] ribosomal large subunit biogenesis  (96 genes)  IEA  
GO:0002181 [list] [network] cytoplasmic translation  (97 genes)  IEA  
GO CC
GO:0022625 [list] [network] cytosolic large ribosomal subunit  (171 genes)  IEA  
GO:0005840 [list] [network] ribosome  (453 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (439 genes)  IEA  
Protein XP_002312115.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 9  (predict for XP_002312115.1)
Subcellular
localization
TargetP
mito 8  (predict for XP_002312115.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7467564

.
ppo-r.4
for
7467564

.
ppo-m.4
for
7467564

.
ppo-u.5
for
7490375

.
ppo-u.5
for
7458094

.
ppo-u.5
for
7494468

.
gma-u.5
for
100800463

.
gma-u.5
for
100499746

.
gma-u.5
for
100305997

.
mtr-u.5
for
120576892

.
ath-u.5
for
AT3G55750

.
ath-u.5
for
AT1G07070

.
ath-u.5
for
AT1G41880

.
vvi-u.5
for
100242662

.
vvi-u.5
for
100258134

.
sly-u.5
for
101265413

.
sly-u.5
for
104647572

.
osa-u.5
for
4339572

.
osa-u.5
for
9271790

.
osa-u.5
for
4330946

.
zma-u.5
for
100282164

.
zma-u.5
for
100282547

.
zma-u.5
for
100281989

.


Ortholog ID: 1086
Species ath ath gma gma sly osa osa zma zma bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol AT1G41880 AT1G07070 LOC100499746 LOC100305958 LOC101265413 LOC4339572 LOC4330946 LOC100282164 LOC100281989 LOC103831899 LOC100258134 LOC100242662 LOC7467564 LOC7458094 LOC25494894 LOC120576892 LOC123165709 LOC123156783 LOC123407436 LOC123449679 LOC107958029 LOC107900454 LOC106445376 LOC106402672 CHLRE_10g459250v5 LOC8055565 LOC8081956 LOC102595077 LOC102586281 LOC102631168 LOC102619537 LOC100826139 LOC100843853 LOC107796252 LOC107799355
Function* Ribosomal protein L35Ae family protein Ribosomal protein L35Ae family protein uncharacterized LOC100499746 uncharacterized LOC100305958 large ribosomal subunit protein eL33z large ribosomal subunit protein eL33z large ribosomal subunit protein eL33w 60S ribosomal protein L35a-like 60S ribosomal protein L35a-like 60S ribosomal protein L35a-1 large ribosomal subunit protein eL33w large ribosomal subunit protein eL33w 60S ribosomal protein L35a-1 60S ribosomal protein L35a-1 60S ribosomal protein L35a-1 60S ribosomal protein L35a-1 60S ribosomal protein L35a-1 60S ribosomal protein L35a-1 60S ribosomal protein L35a-1-like 60S ribosomal protein L35a-1-like 60S ribosomal protein L35a-3 60S ribosomal protein L35a-1 60S ribosomal protein L35a-1-like 60S ribosomal protein L35a-1 ribosomal protein L35a 60S ribosomal protein L35a-1 60S ribosomal protein L35a-1 60S ribosomal protein L35a-4-like 60S ribosomal protein L35a-2 60S ribosomal protein L35a-1 60S ribosomal protein L35a-1 60S ribosomal protein L35a-1 60S ribosomal protein L35a-1 large ribosomal subunit protein eL33y-like large ribosomal subunit protein eL33y
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 20
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 18
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 14
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 15
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 14
ppo01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 14
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 11
tae04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 19
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 20
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 12
bdi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 21
bdi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 13
nta03018 RNA degradation 3
nta03040 Spliceosome 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 840799 837218 100499746 100305958 101265413 4339572 4330946 100282164 100281989 103831899 100258134 100242662 7467564 7458094 25494894 120576892 123165709 123156783 123407436 123449679 107958029 107900454 106445376 106402672 5724135 8055565 8081956 102595077 102586281 102631168 102619537 100826139 100843853 107796252 107799355
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