ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
gma-u.5	100499746	uncharacterized LOC100499746
gma-r.7	100499746	uncharacterized LOC100499746
gma-u.5	100305958	uncharacterized LOC100305958
gma-u.5	100305997	uncharacterized LOC100305997
gma-u.5	100800463	60S ribosomal protein L35a-1-like
mtr-u.5	25494894	60S ribosomal protein L35a-1
ppo-u.5	7494468	60S ribosomal protein L35a-1
ppo-u.5	7458094	60S ribosomal protein L35a-1
ppo-u.5	7467564	60S ribosomal protein L35a-1
ath-u.5	AT3G55750	Ribosomal protein L35Ae family protein
ath-u.5	AT1G07070	Ribosomal protein L35Ae family protein
ath-u.5	AT1G41880	Ribosomal protein L35Ae family protein
bra-r.6	103841484	60S ribosomal protein L35a-2
bra-r.6	103830708	60S ribosomal protein L35a-1
vvi-u.5	100258134	large ribosomal subunit protein eL33w
vvi-u.5	100242662	large ribosomal subunit protein eL33w
ghi-r.1	107935464	60S ribosomal protein L35a-1
ghi-r.1	107919797	60S ribosomal protein L35a-1
ghi-r.1	107929566	60S ribosomal protein L35a-1
bna-r.1	106414973	60S ribosomal protein L35a-2-like
bna-r.1	106354340	60S ribosomal protein L35a-1
bna-r.1	106445376	60S ribosomal protein L35a-1-like
cit-r.1	102619537	60S ribosomal protein L35a-1
cit-r.1	102631168	60S ribosomal protein L35a-1
sly-u.5	101265413	large ribosomal subunit protein eL33z
sly-u.5	104647572	60S ribosomal protein L35a-3
sot-r.1	102589687	60S ribosomal protein L35a-3
sot-r.1	102589364	60S ribosomal protein L35a-3-like
sot-r.1	102586281	60S ribosomal protein L35a-2
nta-r.1	107768641	large ribosomal subunit protein eL33y
nta-r.1	107779239	large ribosomal subunit protein eL33y
nta-r.1	107796252	large ribosomal subunit protein eL33y-like
osa-u.5	4339572	large ribosomal subunit protein eL33z
osa-u.5	4330946	large ribosomal subunit protein eL33w
osa-u.5	9271790	large ribosomal subunit protein eL33z
zma-u.5	100282164	60S ribosomal protein L35a-like
zma-u.5	100193672	60S ribosomal protein L35a-like
zma-u.5	100282547	60S ribosomal protein L35Ae-like
tae-r.2	123138742	60S ribosomal protein L35a-1
tae-r.2	123067279	60S ribosomal protein L35a-1
hvu-r.1	123407436	60S ribosomal protein L35a-1-like
hvu-r.1	123404003	60S ribosomal protein L35a-1-like
hvu-r.1	123449679	60S ribosomal protein L35a-1-like
sbi-r.1	8055565	60S ribosomal protein L35a-1
sbi-r.1	8081956	60S ribosomal protein L35a-1
sbi-r.1	8065446	60S ribosomal protein L35a-1
bdi-r.1	100826139	60S ribosomal protein L35a-1
bdi-r.1	100832242	60S ribosomal protein L35a-1
bdi-r.1	100843853	60S ribosomal protein L35a-1
cre-r.1	CHLRE_10g459250v5	ribosomal protein L35a

Top 50 coexpressed genes to 100499746 (gma-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100499746 (gma-u.5 coexpression data)

CoexMap"100499746"

[Cytoscape]

Annotation

functional annotation

KEGG

gmx03010 [list] [network] Ribosome (1072 genes)

GO BP

GO:0002181 [list] [network] cytoplasmic translation	(114 genes)	IEA
GO:0042273 [list] [network] ribosomal large subunit biogenesis	(156 genes)	IEA

GO CC

GO:0022625 [list] [network] cytosolic large ribosomal subunit	(230 genes)	IEA
GO:0005840 [list] [network] ribosome	(633 genes)	IEA

GO MF

GO:0003735 [list] [network] structural constituent of ribosome

(610 genes)

IEA

Protein

NP_001235452.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 6, nucl 3, cyto_pero 3, cyto_E.R. 3, cyto_plas 3

(predict for NP_001235452.1)

Subcellular
localization
TargetP

mito 8

(predict for NP_001235452.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100499746	gma-r.7 for 100499746	gma-u.5 for 100305958	gma-u.5 for 100305997	gma-u.5 for 100800463	mtr-u.5 for 25494894	ppo-u.5 for 7494468	ppo-u.5 for 7458094	ppo-u.5 for 7467564	ath-u.5 for AT3G55750	ath-u.5 for AT1G07070	ath-u.5 for AT1G41880	bra-r.6 for 103841484	bra-r.6 for 103830708	vvi-u.5 for 100258134	vvi-u.5 for 100242662	ghi-r.1 for 107935464	ghi-r.1 for 107919797	ghi-r.1 for 107929566	bna-r.1 for 106414973	bna-r.1 for 106354340	bna-r.1 for 106445376	cit-r.1 for 102619537	cit-r.1 for 102631168	sly-u.5 for 101265413	sly-u.5 for 104647572	sot-r.1 for 102589687	sot-r.1 for 102589364	sot-r.1 for 102586281	nta-r.1 for 107768641	nta-r.1 for 107779239	nta-r.1 for 107796252	osa-u.5 for 4339572	osa-u.5 for 4330946	osa-u.5 for 9271790	zma-u.5 for 100282164	zma-u.5 for 100193672	zma-u.5 for 100282547	tae-r.2 for 123138742	tae-r.2 for 123067279	hvu-r.1 for 123407436	hvu-r.1 for 123404003	hvu-r.1 for 123449679	sbi-r.1 for 8055565	sbi-r.1 for 8081956	sbi-r.1 for 8065446	bdi-r.1 for 100826139	bdi-r.1 for 100832242	bdi-r.1 for 100843853	cre-r.1 for CHLRE_10g459250v5

Ortholog

Ortholog ID: 1086

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

uncharacterized LOC100499746

uncharacterized LOC100305958

uncharacterized LOC100305997

60S ribosomal protein L35a-1

Ribosomal protein L35Ae family protein

60S ribosomal protein L35a-1

large ribosomal subunit protein eL33w

60S ribosomal protein L35a-3

60S ribosomal protein L35a-1

60S ribosomal protein L35a-2-like

60S ribosomal protein L35a-1-like

60S ribosomal protein L35a-1

large ribosomal subunit protein eL33z

60S ribosomal protein L35a-3

60S ribosomal protein L35a-3-like

60S ribosomal protein L35a-2

60S ribosomal protein L35a-4-like

large ribosomal subunit protein eL33y

large ribosomal subunit protein eL33y-like

large ribosomal subunit protein eL33y

large ribosomal subunit protein eL33z

large ribosomal subunit protein eL33w

large ribosomal subunit protein eL33z

60S ribosomal protein L35a-like

60S ribosomal protein L35a-1

60S ribosomal protein L35a-1-like

60S ribosomal protein L35a-1

ribosomal protein L35a

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	14
mtr03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	11

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	14
ppo01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	15
bra03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	12

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	15

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	14

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	10

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	14

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	20
sly04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	8
sly03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	14
nta03018	RNA degradation	2
nta03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	13
nta03018	RNA degradation	3
nta03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	18
osa04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	14
osa03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	18
osa04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	11

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	11
tae04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	13
tae04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	19
hvu04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03008	Ribosome biogenesis in eukaryotes	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	20
sbi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	12
bdi03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	21
bdi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03010	Ribosome	17

Expression

Expression pattern

Entrez Gene ID^*

100499746

100305958

100305997

25494894

120576892

7494468

7458094

7467564

824741

837218

840799

103831899

100258134

100242662

107939907

107958029

107900454

106414973

106445376

106402672

102619537

102631168

101265413

104647572

102589364

102586281

102595077

107768641

107796252

107799355

4339572

4330946

9271790

100282164

100193672

100281989

123165709

123156783

123148862

123407436

123404003

123449679

8055565

8081956

8063563

100826139

100843853

100846452

5724135

The preparation time of this page was 0.2 [sec].


Species	gma	mtr	ppo	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	5	1	3	3	2	2	3	3	2	2	3	3	3	3	2	3	3	3	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100499746 (gma-u.5 coexpression data)

Top 50 enrichment test to 100499746 (gma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**