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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7467609   beta-1,4-xylosyltransferase IRX9 
 ppo-r.4   7467609   beta-1,4-xylosyltransferase IRX9 
 ppo-m.4   7467609   beta-1,4-xylosyltransferase IRX9 
 ppo-u.5   18100226   beta-1,4-xylosyltransferase IRX9 
 gma-u.5   100777749   beta-1,4-xylosyltransferase IRX9 
 gma-u.5   100782450   beta-1,4-xylosyltransferase IRX9 
 mtr-u.5   112416240   beta-1,4-xylosyltransferase IRX9 
 ath-u.5   IRX9   Nucleotide-diphospho-sugar transferases superfamily protein 
 vvi-u.5   100249957   beta-1,4-xylosyltransferase IRX9 
 sly-u.5   101254230   beta-1,4-xylosyltransferase IRX9 
 osa-u.5   4337665   probable glucuronosyltransferase Os05g0123100 
 osa-u.5   4332485   probable glucuronosyltransferase Os03g0287800 
 zma-u.5   113687178   uncharacterized LOC113687178 
 zma-u.5   100281273   beta3-glucuronyltransferase 
 zma-u.5   100272909   beta3-glucuronyltransferase 

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Top 50 coexpressed genes to 7467609 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7467609 (ppo-u.5 coexpression data)

CoexMap"7467609"


ppoLOC7467609 | Entrez gene ID : 7467609    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 2 1 1 1 1 2 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010417 [list] [network] glucuronoxylan biosynthetic process  (11 genes)  IEA  
GO:0009834 [list] [network] plant-type secondary cell wall biogenesis  (22 genes)  IEA  
GO CC
GO:0000139 [list] [network] Golgi membrane  (110 genes)  IEA  
GO MF
GO:0015018 [list] [network] galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity  (6 genes)  IEA  
GO:0042285 [list] [network] xylosyltransferase activity  (9 genes)  IEA  
Protein XP_002323456.1 [sequence] [blastp]
XP_024442920.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  mito 3,  chlo_mito 3,  nucl 1,  plas 1,  cyto_mito 1,  nucl_plas 1  (predict for XP_002323456.1)
chlo 4,  nucl 1,  mito 1,  plas 1,  nucl_plas 1,  mito_plas 1  (predict for XP_024442920.1)
Subcellular
localization
TargetP
mito 4  (predict for XP_002323456.1)
mito 4  (predict for XP_024442920.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7467609

.
ppo-r.4
for
7467609

.
ppo-m.4
for
7467609

.
ppo-u.5
for
18100226

.
gma-u.5
for
100777749

.
gma-u.5
for
100782450

.
mtr-u.5
for
112416240

.
ath-u.5
for
IRX9

.
vvi-u.5
for
100249957

.
sly-u.5
for
101254230

.
osa-u.5
for
4337665

.
osa-u.5
for
4332485

.
zma-u.5
for
113687178

.
zma-u.5
for
100281273

.
zma-u.5
for
100272909

.


Ortholog ID: 5704
Species ath gma sly osa osa zma zma bra vvi ppo ppo mtr tae tae hvu hvu ghi ghi bna bna sbi sbi sot cit bdi bdi nta nta
Symbol IRX9 LOC100777749 LOC101254230 LOC4337665 LOC4332485 LOC100272909 LOC113687178 LOC103867226 LOC100249957 LOC18100226 LOC7467609 LOC112416240 LOC123092492 LOC100125730 LOC123406394 LOC123448939 LOC107891109 LOC107889620 LOC106398725 LOC106385559 LOC8084039 LOC8071252 LOC102586011 LOC102618815 LOC100831545 LOC100835571 LOC107762480 LOC107764680
Function* Nucleotide-diphospho-sugar transferases superfamily protein beta-1,4-xylosyltransferase IRX9 beta-1,4-xylosyltransferase IRX9 probable glucuronosyltransferase Os05g0123100 probable glucuronosyltransferase Os03g0287800 beta3-glucuronyltransferase uncharacterized LOC113687178 probable beta-1,4-xylosyltransferase IRX9 beta-1,4-xylosyltransferase IRX9 beta-1,4-xylosyltransferase IRX9 beta-1,4-xylosyltransferase IRX9 beta-1,4-xylosyltransferase IRX9 probable glucuronosyltransferase Os03g0287800 probable glucuronosyltransferase Os03g0287800 probable beta-1,4-xylosyltransferase GT43A probable glucuronosyltransferase Os03g0287800 probable beta-1,4-xylosyltransferase IRX9 beta-1,4-xylosyltransferase IRX9 beta-1,4-xylosyltransferase IRX9 beta-1,4-xylosyltransferase IRX9 probable glucuronosyltransferase Os03g0287800 probable glucuronosyltransferase Os05g0123100 probable beta-1,4-xylosyltransferase IRX9 beta-1,4-xylosyltransferase IRX9 probable glucuronosyltransferase Os05g0123100 probable glucuronosyltransferase Os03g0287800 beta-1,4-xylosyltransferase IRX9 beta-1,4-xylosyltransferase IRX9
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00520 Amino sugar and nucleotide sugar metabolism 2
zma01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00520 Amino sugar and nucleotide sugar metabolism 2
bra01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00999 Biosynthesis of various plant secondary metabolites 4
vvi00909 Sesquiterpenoid and triterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00520 Amino sugar and nucleotide sugar metabolism 6
tae01250 Biosynthesis of nucleotide sugars 6
tae00040 Pentose and glucuronate interconversions 3
tae00053 Ascorbate and aldarate metabolism 3
tae00541 Biosynthesis of various nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00520 Amino sugar and nucleotide sugar metabolism 2
tae01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04145 Phagosome 2
ghi04148 Efferocytosis 2
ghi04517 IgSF CAM signaling 2
ghi04518 Integrin signaling 2
ghi04620 Toll-like receptor signaling pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00520 Amino sugar and nucleotide sugar metabolism 3
bna01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00520 Amino sugar and nucleotide sugar metabolism 3
bna01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 818285 100777749 101254230 4337665 4332485 100272909 113687178 103867226 100249957 18100226 7467609 112416240 123092492 100125730 123406394 123448939 107891109 107889620 106398725 106385559 8084039 8071252 102586011 102618815 100831545 100835571 107762480 107764680
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