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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7467928   40S ribosomal protein S9-2 
 ppo-r.4   7467928   40S ribosomal protein S9-2 
 ppo-m.4   7467928   40S ribosomal protein S9-2 
 ppo-u.5   7465257   40S ribosomal protein S9-2 
 ppo-u.5   7470253   40S ribosomal protein S9-2 
 ppo-u.5   18100626   40S ribosomal protein S9-2 
 gma-u.5   100790098   40S ribosomal protein S9-2-like 
 gma-u.5   100807649   40S ribosomal protein S9-2 
 gma-u.5   100305663   putative 40S ribosomal protein S9 
 mtr-u.5   11416568   40S ribosomal protein S9-2 
 mtr-u.5   11419392   40S ribosomal protein S9-2 
 mtr-u.5   11428102   40S ribosomal protein S9-2 
 ath-u.5   AT5G15200   Ribosomal protein S4 
 ath-u.5   AT5G39850   Ribosomal protein S4 
 vvi-u.5   100267189   small ribosomal subunit protein uS4y 
 vvi-u.5   100264515   small ribosomal subunit protein uS4y 
 vvi-u.5   100260300   small ribosomal subunit protein uS4y 
 sly-u.5   101253922   small ribosomal subunit protein uS4y 
 sly-u.5   101257063   small ribosomal subunit protein uS4y 
 sly-u.5   101261708   small ribosomal subunit protein uS4y 
 osa-u.5   4350869   small ribosomal subunit protein uS4y 
 osa-u.5   4331662   small ribosomal subunit protein uS4y 
 osa-u.5   9268088   small ribosomal subunit protein uS4y 
 zma-u.5   100282862   40S ribosomal protein S9 
 zma-u.5   100283332   40S ribosomal protein S9 
 zma-u.5   100192774   40S ribosomal protein S9-like 

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Top 50 coexpressed genes to 7467928 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7467928 (ppo-u.5 coexpression data)

CoexMap"7467928"


ppoLOC7467928 | Entrez gene ID : 7467928    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 6 3 3 2 3 3 3 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop03010 [list] [network] Ribosome (698 genes)
GO BP
GO:0045903 [list] [network] positive regulation of translational fidelity  (8 genes)  IEA  
GO:0006412 [list] [network] translation  (598 genes)  IEA  
GO CC
GO:0022627 [list] [network] cytosolic small ribosomal subunit  (109 genes)  IEA  
GO MF
GO:0019843 [list] [network] rRNA binding  (93 genes)  IEA  
GO:0003735 [list] [network] structural constituent of ribosome  (439 genes)  IEA  
Protein XP_002324730.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 3,  mito 3,  chlo 2,  cyto 2  (predict for XP_002324730.1)
Subcellular
localization
TargetP
other 8  (predict for XP_002324730.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7467928

.
ppo-r.4
for
7467928

.
ppo-m.4
for
7467928

.
ppo-u.5
for
7465257

.
ppo-u.5
for
7470253

.
ppo-u.5
for
18100626

.
gma-u.5
for
100790098

.
gma-u.5
for
100807649

.
gma-u.5
for
100305663

.
mtr-u.5
for
11416568

.
mtr-u.5
for
11419392

.
mtr-u.5
for
11428102

.
ath-u.5
for
AT5G15200

.
ath-u.5
for
AT5G39850

.
vvi-u.5
for
100267189

.
vvi-u.5
for
100264515

.
vvi-u.5
for
100260300

.
sly-u.5
for
101253922

.
sly-u.5
for
101257063

.
sly-u.5
for
101261708

.
osa-u.5
for
4350869

.
osa-u.5
for
4331662

.
osa-u.5
for
9268088

.
zma-u.5
for
100282862

.
zma-u.5
for
100283332

.
zma-u.5
for
100192774

.


Ortholog ID: 1403
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit bdi bdi nta nta
Symbol AT5G15200 AT5G39850 LOC100810569 LOC100790098 LOC101253922 LOC101257063 LOC9268088 LOC4331662 LOC100192774 LOC100283332 LOC103846432 LOC103849898 LOC100264515 LOC100267189 LOC7471882 LOC7465257 LOC11419392 LOC11428102 LOC123102726 LOC123044114 LOC123425201 LOC123451868 LOC107914254 LOC107926286 LOC111213594 LOC106372137 CHLRE_08g359750v5 LOC8063507 LOC8063511 LOC102594083 LOC102584617 LOC102625078 LOC100832267 LOC100832181 LOC107761978 LOC107805765
Function* Ribosomal protein S4 Ribosomal protein S4 40S ribosomal protein S9-2 40S ribosomal protein S9-2-like small ribosomal subunit protein uS4y small ribosomal subunit protein uS4y small ribosomal subunit protein uS4y small ribosomal subunit protein uS4y 40S ribosomal protein S9-like 40S ribosomal protein S9 40S ribosomal protein S9-1 40S ribosomal protein S9-2 small ribosomal subunit protein uS4y small ribosomal subunit protein uS4y 40S ribosomal protein S9-2 40S ribosomal protein S9-2 40S ribosomal protein S9-2 40S ribosomal protein S9-2 40S ribosomal protein S9-2 40S ribosomal protein S9-2 40S ribosomal protein S9-2 40S ribosomal protein S9-2-like 40S ribosomal protein S9-2 40S ribosomal protein S9-2 40S ribosomal protein S9-1 40S ribosomal protein S9-1 uncharacterized protein 40S ribosomal protein S9-2 40S ribosomal protein S9-2 40S ribosomal protein S9-2-like 40S ribosomal protein S9-2 40S ribosomal protein S9-2 40S ribosomal protein S9-2 40S ribosomal protein S9-2 small ribosomal subunit protein uS4y small ribosomal subunit protein uS4y
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 17
gma03013 Nucleocytoplasmic transport 2
gma03015 mRNA surveillance pathway 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 11
ppo00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 21
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 8
mtr03082 ATP-dependent chromatin remodeling 2
mtr03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 11
tae03020 RNA polymerase 3
tae00230 Purine metabolism 3
tae00240 Pyrimidine metabolism 3
tae01232 Nucleotide metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 17
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 18
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 20
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 21
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 8
nta00230 Purine metabolism 3
nta00240 Pyrimidine metabolism 3
nta01232 Nucleotide metabolism 3
nta01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 10
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831372 833981 100810569 100790098 101253922 101257063 9268088 4331662 100192774 100283332 103846432 103849898 100264515 100267189 7471882 7465257 11419392 11428102 123102726 123044114 123425201 123451868 107914254 107926286 111213594 106372137 5727862 8063507 8063511 102594083 102584617 102625078 100832267 100832181 107761978 107805765
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