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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7468366   pentatricopeptide repeat-containing protein At1g52640, mitochondrial 
 ppo-r.4   7468366   pentatricopeptide repeat-containing protein At1g52640, mitochondrial 
 ppo-m.4   7468366   pentatricopeptide repeat-containing protein At1g52640, mitochondrial 
 gma-u.5   100794364   pentatricopeptide repeat-containing protein At1g52640, mitochondrial 
 gma-u.5   100810899   pentatricopeptide repeat-containing protein At1g52640, mitochondrial 
 mtr-u.5   11411146   pentatricopeptide repeat-containing protein At1g52640, mitochondrial 
 sly-u.5   101263504   pentatricopeptide repeat-containing protein At1g52640, mitochondrial 
 osa-u.5   9271232   heat shock factor-binding protein 
 zma-u.5   541966   empty pericarp 2 

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Top 50 coexpressed genes to 7468366 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7468366 (ppo-u.5 coexpression data)

CoexMap"7468366"


ppoLOC7468366 | Entrez gene ID : 7468366    
Species ppo gma mtr sly osa zma sbi nta bra cre vvi cit hvu bdi sot tae ath bna ghi
Paralog 3 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0008380 [list] [network] RNA splicing  (245 genes)  IEA  
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_002305285.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  mito 4,  cyto 1,  E.R. 1,  pero 1,  cyto_pero 1,  cyto_E.R. 1  (predict for XP_002305285.2)
Subcellular
localization
TargetP
mito 7,  chlo 3  (predict for XP_002305285.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7468366

.
ppo-r.4
for
7468366

.
ppo-m.4
for
7468366

.
gma-u.5
for
100794364

.
gma-u.5
for
100810899

.
mtr-u.5
for
11411146

.
sly-u.5
for
101263504

.
osa-u.5
for
9271232

.
zma-u.5
for
541966

.


Ortholog ID: 9840
Species gma gma sly osa zma bra ppo mtr tae tae hvu ghi ghi sbi sot cit bdi nta nta
Symbol LOC100810899 LOC100794364 LOC101263504 LOC9271232 LOC541966 LOC103871199 LOC7468366 LOC11411146 LOC123103624 LOC123111838 LOC123395556 LOC107904581 LOC107923163 LOC8056184 LOC102594967 LOC102629893 LOC104584669 LOC107779853 LOC107765676
Function* pentatricopeptide repeat-containing protein At1g52640, mitochondrial pentatricopeptide repeat-containing protein At1g52640, mitochondrial pentatricopeptide repeat-containing protein At1g52640, mitochondrial heat shock factor-binding protein empty pericarp 2 pentatricopeptide repeat-containing protein At1g52640, mitochondrial pentatricopeptide repeat-containing protein At1g52640, mitochondrial pentatricopeptide repeat-containing protein At1g52640, mitochondrial heat shock factor-binding protein heat shock factor-binding protein heat shock factor-binding protein-like pentatricopeptide repeat-containing protein At1g52640, mitochondrial-like pentatricopeptide repeat-containing protein At1g52640, mitochondrial pentatricopeptide repeat-containing protein At1g52640, mitochondrial pentatricopeptide repeat-containing protein At1g52640, mitochondrial pentatricopeptide repeat-containing protein At1g52640, mitochondrial heat shock factor-binding protein 1 pentatricopeptide repeat-containing protein At1g52640, mitochondrial-like pentatricopeptide repeat-containing protein At1g52640, mitochondrial-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma03008 Ribosome biogenesis in eukaryotes 2
gma03020 RNA polymerase 2
gma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00190 Oxidative phosphorylation 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00190 Oxidative phosphorylation 3
zma04120 Ubiquitin mediated proteolysis 3
zma03015 mRNA surveillance pathway 2
zma03083 Polycomb repressive complex 2
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 2
hvu04145 Phagosome 2
hvu04148 Efferocytosis 2
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04142 Lysosome 2
sbi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00190 Oxidative phosphorylation 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100810899 100794364 101263504 9271232 541966 103871199 7468366 11411146 123103624 123111838 123395556 107904581 107923163 8056184 102594967 102629893 104584669 107779853 107765676
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