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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7469556   transmembrane E3 ubiquitin-protein ligase FLY2 
 ppo-r.4   7469556   transmembrane E3 ubiquitin-protein ligase FLY2 
 ppo-m.4   7469556   transmembrane E3 ubiquitin-protein ligase FLY2 
 ppo-u.5   18106775   transmembrane E3 ubiquitin-protein ligase FLY2 
 gma-u.5   100802452   transmembrane E3 ubiquitin-protein ligase FLY2 
 gma-u.5   100785460   transmembrane E3 ubiquitin-protein ligase FLY2 
 gma-u.5   100780140   transmembrane E3 ubiquitin-protein ligase FLY1 
 mtr-u.5   25492906   transmembrane E3 ubiquitin-protein ligase FLY2 
 ath-u.5   AT2G20650   RING/U-box superfamily protein 
 ath-u.5   AT4G28370   RING/U-box superfamily protein 
 vvi-u.5   100243855   transmembrane E3 ubiquitin-protein ligase FLY2 
 sly-u.5   101247339   transmembrane E3 ubiquitin-protein ligase FLY2 
 sly-u.5   101267382   transmembrane E3 ubiquitin-protein ligase FLY1-like 
 osa-u.5   4343316   transmembrane E3 ubiquitin-protein ligase FLY2 
 zma-u.5   103633202   transmembrane E3 ubiquitin-protein ligase FLY2 

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Top 50 coexpressed genes to 7469556 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7469556 (ppo-u.5 coexpression data)

CoexMap"7469556"


ppoLOC7469556 | Entrez gene ID : 7469556    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 3 1 2 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (777 genes)  IEA  
Protein XP_002309743.2 [sequence] [blastp]
XP_024461322.1 [sequence] [blastp]
XP_052310650.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 2,  vacu 2,  E.R. 2,  E.R._vacu 2,  E.R._plas 2  (predict for XP_002309743.2)
E.R. 3,  plas 2,  vacu 2,  nucl 1,  cyto 1,  mito 1,  golg 1,  cyto_nucl 1  (predict for XP_024461322.1)
cyto 6,  nucl 1,  plas 1,  nucl_plas 1  (predict for XP_052310650.1)
Subcellular
localization
TargetP
mito 7  (predict for XP_002309743.2)
mito 7  (predict for XP_024461322.1)
other 8,  scret 3  (predict for XP_052310650.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7469556

.
ppo-r.4
for
7469556

.
ppo-m.4
for
7469556

.
ppo-u.5
for
18106775

.
gma-u.5
for
100802452

.
gma-u.5
for
100785460

.
gma-u.5
for
100780140

.
mtr-u.5
for
25492906

.
ath-u.5
for
AT2G20650

.
ath-u.5
for
AT4G28370

.
vvi-u.5
for
100243855

.
sly-u.5
for
101247339

.
sly-u.5
for
101267382

.
osa-u.5
for
4343316

.
zma-u.5
for
103633202

.


Ortholog ID: 5468
Species ath ath gma gma sly sly osa zma bra bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot sot cit bdi nta nta
Symbol AT4G28370 AT2G20650 LOC100785460 LOC102667590 LOC101247339 LOC101267382 LOC4343316 LOC103633202 LOC103834763 LOC103828154 LOC100243855 LOC18106775 LOC7469556 LOC25492906 LOC123188526 LOC123052591 LOC123425962 LOC107909279 LOC107886787 LOC106357544 LOC106361200 CHLRE_08g381900v5 LOC110432900 LOC102581881 LOC102603721 LOC102606828 LOC100834287 LOC107794498 LOC107758944
Function* RING/U-box superfamily protein RING/U-box superfamily protein transmembrane E3 ubiquitin-protein ligase FLY2 transmembrane E3 ubiquitin-protein ligase FLY1 transmembrane E3 ubiquitin-protein ligase FLY2 transmembrane E3 ubiquitin-protein ligase FLY1-like transmembrane E3 ubiquitin-protein ligase FLY2 transmembrane E3 ubiquitin-protein ligase FLY2 transmembrane E3 ubiquitin-protein ligase FLY1 transmembrane E3 ubiquitin-protein ligase FLY2 transmembrane E3 ubiquitin-protein ligase FLY2 transmembrane E3 ubiquitin-protein ligase FLY2 transmembrane E3 ubiquitin-protein ligase FLY2 transmembrane E3 ubiquitin-protein ligase FLY2 transmembrane E3 ubiquitin-protein ligase FLY1 transmembrane E3 ubiquitin-protein ligase FLY1 transmembrane E3 ubiquitin-protein ligase FLY1-like transmembrane E3 ubiquitin-protein ligase FLY2 transmembrane E3 ubiquitin-protein ligase FLY2 transmembrane E3 ubiquitin-protein ligase FLY2 transmembrane E3 ubiquitin-protein ligase FLY1-like uncharacterized protein DSC E3 ubiquitin ligase complex subunit 1-like transmembrane E3 ubiquitin-protein ligase 1-like DSC E3 ubiquitin ligase complex subunit 1 transmembrane E3 ubiquitin-protein ligase FLY2 transmembrane E3 ubiquitin-protein ligase 1 transmembrane E3 ubiquitin-protein ligase FLY1-like transmembrane E3 ubiquitin-protein ligase FLY1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01200 Carbon metabolism 3
osa00010 Glycolysis / Gluconeogenesis 2
osa00020 Citrate cycle (TCA cycle) 2
osa01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00520 Amino sugar and nucleotide sugar metabolism 2
bra01250 Biosynthesis of nucleotide sugars 2
bra00514 Other types of O-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00220 Arginine biosynthesis 2
bra01210 2-Oxocarboxylic acid metabolism 2
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 4
ppo04142 Lysosome 3
ppo05100 Bacterial invasion of epithelial cells 3
ppo04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 4
tae03250 Viral life cycle - HIV-1 2
tae03272 Virion - Hepatitis viruses 2
tae04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04712 Circadian rhythm - plant 2
hvu00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03015 mRNA surveillance pathway 4
sot04382 Cornified envelope formation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00052 Galactose metabolism 2
cit00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00564 Glycerophospholipid metabolism 2
bdi04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03060 Protein export 4
nta04141 Protein processing in endoplasmic reticulum 4
nta04148 Efferocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 828953 816593 100785460 102667590 101247339 101267382 4343316 103633202 103834763 103828154 100243855 18106775 7469556 25492906 123188526 123052591 123425962 107909279 107886787 106357544 106361200 5719849 110432900 102581881 102603721 102606828 100834287 107794498 107758944
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