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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7472148   uncharacterized LOC7472148 
 ppo-r.4   7472148   uncharacterized LOC7472148 
 gma-u.5   100796560   nucleoporin NUP188 
 mtr-u.5   11442832   uncharacterized LOC11442832 
 ath-u.5   AT4G38760   nucleoporin (DUF3414) 
 vvi-u.5   100264071   uncharacterized LOC100264071 
 sly-u.5   101245721   uncharacterized LOC101245721 
 osa-u.5   9269589   uncharacterized LOC9269589 
 zma-u.5   100279122   uncharacterized LOC100279122 

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Top 50 coexpressed genes to 7472148 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7472148 (ppo-u.5 coexpression data)

CoexMap"7472148"


ppoLOC7472148 | Entrez gene ID : 7472148    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 2 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop03013 [list] [network] Nucleocytoplasmic transport (142 genes)
GO BP
GO:0006405 [list] [network] RNA export from nucleus  (55 genes)  IEA  
GO:0006606 [list] [network] protein import into nucleus  (66 genes)  IEA  
GO CC
GO:0044611 [list] [network] nuclear pore inner ring  (2 genes)  IEA  
GO MF
GO:0017056 [list] [network] structural constituent of nuclear pore  (21 genes)  IEA  
Protein XP_024463972.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  plas 2,  cyto 1,  E.R._plas 1  (predict for XP_024463972.2)
Subcellular
localization
TargetP
other 5  (predict for XP_024463972.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7472148

.
ppo-r.4
for
7472148

.
gma-u.5
for
100796560

.
mtr-u.5
for
11442832

.
ath-u.5
for
AT4G38760

.
vvi-u.5
for
100264071

.
sly-u.5
for
101245721

.
osa-u.5
for
9269589

.
zma-u.5
for
100279122

.


Ortholog ID: 11389
Species ath gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol AT4G38760 LOC100796560 LOC101245721 LOC9269589 LOC100279122 LOC103828087 LOC100264071 LOC7472148 LOC11442832 LOC123165703 LOC123149923 LOC123413161 LOC107945049 LOC107927750 LOC106410131 LOC106349479 LOC8067606 LOC102591984 LOC102622006 LOC100837705 LOC107815035 LOC107807932
Function* nucleoporin (DUF3414) nucleoporin NUP188 uncharacterized LOC101245721 uncharacterized LOC9269589 uncharacterized LOC100279122 uncharacterized LOC103828087 uncharacterized LOC100264071 uncharacterized LOC7472148 uncharacterized LOC11442832 uncharacterized LOC123165703 uncharacterized LOC123149923 uncharacterized LOC123413161 uncharacterized LOC107945049 uncharacterized LOC107927750 uncharacterized LOC106410131 uncharacterized LOC106349479 uncharacterized LOC8067606 uncharacterized LOC102591984 uncharacterized LOC102622006 uncharacterized LOC100837705 uncharacterized LOC107815035 uncharacterized LOC107807932
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 8
gma03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 4
sly03008 Ribosome biogenesis in eukaryotes 2
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 4
osa03013 Nucleocytoplasmic transport 3
osa03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 4
zma03015 mRNA surveillance pathway 2
zma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 5
bra03013 Nucleocytoplasmic transport 5
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 2
ppo03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 5
mtr04120 Ubiquitin mediated proteolysis 2
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 6
ghi04120 Ubiquitin mediated proteolysis 4
ghi03020 RNA polymerase 2
ghi03015 mRNA surveillance pathway 2
ghi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 6
ghi03013 Nucleocytoplasmic transport 6
ghi03020 RNA polymerase 2
ghi03015 mRNA surveillance pathway 2
ghi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 7
bna03440 Homologous recombination 2
bna03450 Non-homologous end-joining 2
bna03420 Nucleotide excision repair 2
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 7
bna03440 Homologous recombination 2
bna03450 Non-homologous end-joining 2
bna03420 Nucleotide excision repair 2
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 3
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 4
cit03013 Nucleocytoplasmic transport 3
cit03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 3
bdi03013 Nucleocytoplasmic transport 3
bdi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 830031 100796560 101245721 9269589 100279122 103828087 100264071 7472148 11442832 123165703 123149923 123413161 107945049 107927750 106410131 106349479 8067606 102591984 102622006 100837705 107815035 107807932
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