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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7474654   binding partner of ACD11 1 
 ppo-r.4   7474654   binding partner of ACD11 1 
 ppo-m.4   7474654   binding partner of ACD11 1 
 ppo-u.5   7491050   binding partner of ACD11 1 
 gma-u.5   100812446   binding partner of ACD11 1 
 gma-u.5   100779011   binding partner of ACD11 1 
 mtr-u.5   11429169   binding partner of ACD11 1 
 ath-u.5   AT5G32450   RNA binding (RRM/RBD/RNP motifs) family protein 
 vvi-u.5   100246079   binding partner of ACD11 1 
 sly-u.5   101253037   binding partner of ACD11 1 
 osa-u.5   4334112   binding partner of ACD11 1 
 zma-u.5   103631469   binding partner of ACD11 1 
 zma-u.5   103630180   binding partner of ACD11 1 
 zma-u.5   100281821   RNA-binding region RNP-1 

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Top 50 coexpressed genes to 7474654 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7474654 (ppo-u.5 coexpression data)

CoexMap"7474654"


ppoLOC7474654 | Entrez gene ID : 7474654    
Species ppo gma mtr ath vvi sly osa zma hvu sot tae nta bra cit ghi bna bdi sbi cre
Paralog 4 2 1 1 1 1 1 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1480 genes)  IEA  
Protein XP_002319148.1 [sequence] [blastp]
XP_024438755.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  cyto_nucl 4,  chlo 1,  nucl 1,  cysk_nucl 1  (predict for XP_002319148.1)
cyto 6,  cyto_nucl 4,  cyto_pero 3,  nucl 1,  cysk_nucl 1,  chlo 1,  mito 1,  extr 1,  chlo_mito 1  (predict for XP_024438755.1)
Subcellular
localization
TargetP
other 8  (predict for XP_002319148.1)
other 8  (predict for XP_024438755.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7474654

.
ppo-r.4
for
7474654

.
ppo-m.4
for
7474654

.
ppo-u.5
for
7491050

.
gma-u.5
for
100812446

.
gma-u.5
for
100779011

.
mtr-u.5
for
11429169

.
ath-u.5
for
AT5G32450

.
vvi-u.5
for
100246079

.
sly-u.5
for
101253037

.
osa-u.5
for
4334112

.
zma-u.5
for
103631469

.
zma-u.5
for
103630180

.
zma-u.5
for
100281821

.


Ortholog ID: 9124
Species ath gma gma sly osa zma zma bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol AT5G32450 LOC100779011 LOC100812446 LOC101253037 LOC4334112 LOC103630180 LOC103631469 LOC103828434 LOC100246079 LOC7474654 LOC7491050 LOC11429169 LOC123105024 LOC123113316 LOC123452232 LOC107891617 LOC107913460 LOC106352100 LOC106357735 LOC8086249 LOC102595744 LOC102628737 LOC100829340 LOC107771444 LOC107758939
Function* RNA binding (RRM/RBD/RNP motifs) family protein binding partner of ACD11 1 binding partner of ACD11 1 binding partner of ACD11 1 binding partner of ACD11 1 binding partner of ACD11 1 binding partner of ACD11 1 binding partner of ACD11 1 binding partner of ACD11 1 binding partner of ACD11 1 binding partner of ACD11 1 binding partner of ACD11 1 binding partner of ACD11 1 binding partner of ACD11 1 binding partner of ACD11 1 binding partner of ACD11 1 binding partner of ACD11 1 binding partner of ACD11 1 binding partner of ACD11 1 binding partner of ACD11 1 binding partner of ACD11 1 binding partner of ACD11 1 binding partner of ACD11 1 binding partner of ACD11 1 binding partner of ACD11 1-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04142 Lysosome 2
gma00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04145 Phagosome 3
gma04148 Efferocytosis 3
gma04517 IgSF CAM signaling 3
gma04518 Integrin signaling 3
gma04620 Toll-like receptor signaling pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 3
ppo04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00062 Fatty acid elongation 2
mtr01040 Biosynthesis of unsaturated fatty acids 2
mtr01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00100 Steroid biosynthesis 3
tae00909 Sesquiterpenoid and triterpenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00564 Glycerophospholipid metabolism 3
tae00565 Ether lipid metabolism 3
tae04144 Endocytosis 3
tae00100 Steroid biosynthesis 3
tae00909 Sesquiterpenoid and triterpenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 4
ghi00190 Oxidative phosphorylation 3
ghi04626 Plant-pathogen interaction 2
ghi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 4
ghi00190 Oxidative phosphorylation 3
ghi04626 Plant-pathogen interaction 2
ghi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00920 Sulfur metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00920 Sulfur metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00520 Amino sugar and nucleotide sugar metabolism 3
sbi01250 Biosynthesis of nucleotide sugars 3
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04145 Phagosome 2
cit04148 Efferocytosis 2
cit04517 IgSF CAM signaling 2
cit04518 Integrin signaling 2
cit04620 Toll-like receptor signaling pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04130 SNARE interactions in vesicular transport 3
bdi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 4
nta04626 Plant-pathogen interaction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 4
nta04626 Plant-pathogen interaction 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 833204 100779011 100812446 101253037 4334112 103630180 103631469 103828434 100246079 7474654 7491050 11429169 123105024 123113316 123452232 107891617 107913460 106352100 106357735 8086249 102595744 102628737 100829340 107771444 107758939
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